Gene : Gorai.013G042800 G. raimondii v2.1
Defline:  (1 of 3) 1.1.1.141 - 15-hydroxyprostaglandin dehydrogenase (NAD(+)) / 15-hydroxyprostaglandin dehydrogenase Genomic Order:  428
Name:  ? Gorai.013G042800 Secondary Identifier:  ? PAC:26790028
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6786 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G042800 0.5kb upstream 0.5kb upstream 13553 true Chr13: 3679540-3693092 Gossypium raimondii
Gorai.013G042800 0.5kb upstream 0.5kb upstream 500 false Chr13: 3692593-3693092 Gossypium raimondii
Gorai.013G042800 0.5kb downstream 0.5kb downstream 13553 true Chr13: 3679040-3692592 Gossypium raimondii
Gorai.013G042800 0.5kb downstream 0.5kb downstream 500 false Chr13: 3679040-3679539 Gossypium raimondii
Gorai.013G042800 1.0kb upstream 1.0kb upstream 14053 true Chr13: 3679540-3693592 Gossypium raimondii
Gorai.013G042800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 3692593-3693592 Gossypium raimondii
Gorai.013G042800 1.0kb downstream 1.0kb downstream 14053 true Chr13: 3678540-3692592 Gossypium raimondii
Gorai.013G042800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 3678540-3679539 Gossypium raimondii
Gorai.013G042800 2.0kb upstream 2.0kb upstream 15053 true Chr13: 3679540-3694592 Gossypium raimondii
Gorai.013G042800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 3692593-3694592 Gossypium raimondii
Gorai.013G042800 2.0kb downstream 2.0kb downstream 15053 true Chr13: 3677540-3692592 Gossypium raimondii
Gorai.013G042800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 3677540-3679539 Gossypium raimondii
Gorai.013G042800 5.0kb upstream 5.0kb upstream 18053 true Chr13: 3679540-3697592 Gossypium raimondii
Gorai.013G042800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 3692593-3697592 Gossypium raimondii
Gorai.013G042800 5.0kb downstream 5.0kb downstream 18053 true Chr13: 3674540-3692592 Gossypium raimondii
Gorai.013G042800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 3674540-3679539 Gossypium raimondii
Gorai.013G042800 10.0kb upstream 10.0kb upstream 23053 true Chr13: 3679540-3702592 Gossypium raimondii
Gorai.013G042800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 3692593-3702592 Gossypium raimondii
Gorai.013G042800 10.0kb downstream 10.0kb downstream 23053 true Chr13: 3669540-3692592 Gossypium raimondii
Gorai.013G042800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 3669540-3679539 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026347 5273 Angiosperm View MSA
123831145 5264 Brassicales-Malvales View MSA
124350075 5266 SBM View MSA
124240470 5268 Malvidae View MSA
124064658 5270 Rosid View MSA
123740721 5271 Pentapetalae View MSA
122785965 5272 Eudicot View MSA
121346916 5274 Embryophyte View MSA
123424584 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain