Gene : Gorai.005G089400 G. raimondii v2.1
Defline:  (1 of 2) 1.14.13.122 - Chlorophyllide-a oxygenase / Cholorophyll-b synthase Genomic Order:  894
Name:  ? Gorai.005G089400 Secondary Identifier:  ? PAC:26806491
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5068 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G089400 0.5kb upstream 0.5kb upstream 4257 true Chr05: 11974464-11978720 Gossypium raimondii
Gorai.005G089400 0.5kb upstream 0.5kb upstream 500 false Chr05: 11978221-11978720 Gossypium raimondii
Gorai.005G089400 0.5kb downstream 0.5kb downstream 4257 true Chr05: 11973964-11978220 Gossypium raimondii
Gorai.005G089400 0.5kb downstream 0.5kb downstream 500 false Chr05: 11973964-11974463 Gossypium raimondii
Gorai.005G089400 1.0kb upstream 1.0kb upstream 4757 true Chr05: 11974464-11979220 Gossypium raimondii
Gorai.005G089400 1.0kb upstream 1.0kb upstream 1000 false Chr05: 11978221-11979220 Gossypium raimondii
Gorai.005G089400 1.0kb downstream 1.0kb downstream 4757 true Chr05: 11973464-11978220 Gossypium raimondii
Gorai.005G089400 1.0kb downstream 1.0kb downstream 1000 false Chr05: 11973464-11974463 Gossypium raimondii
Gorai.005G089400 2.0kb upstream 2.0kb upstream 5757 true Chr05: 11974464-11980220 Gossypium raimondii
Gorai.005G089400 2.0kb upstream 2.0kb upstream 2000 false Chr05: 11978221-11980220 Gossypium raimondii
Gorai.005G089400 2.0kb downstream 2.0kb downstream 5757 true Chr05: 11972464-11978220 Gossypium raimondii
Gorai.005G089400 2.0kb downstream 2.0kb downstream 2000 false Chr05: 11972464-11974463 Gossypium raimondii
Gorai.005G089400 5.0kb upstream 5.0kb upstream 8757 true Chr05: 11974464-11983220 Gossypium raimondii
Gorai.005G089400 5.0kb upstream 5.0kb upstream 5000 false Chr05: 11978221-11983220 Gossypium raimondii
Gorai.005G089400 5.0kb downstream 5.0kb downstream 8757 true Chr05: 11969464-11978220 Gossypium raimondii
Gorai.005G089400 5.0kb downstream 5.0kb downstream 5000 false Chr05: 11969464-11974463 Gossypium raimondii
Gorai.005G089400 10.0kb upstream 10.0kb upstream 13757 true Chr05: 11974464-11988220 Gossypium raimondii
Gorai.005G089400 10.0kb upstream 10.0kb upstream 10000 false Chr05: 11978221-11988220 Gossypium raimondii
Gorai.005G089400 10.0kb downstream 10.0kb downstream 13757 true Chr05: 11964464-11978220 Gossypium raimondii
Gorai.005G089400 10.0kb downstream 10.0kb downstream 10000 false Chr05: 11964464-11974463 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838199 5264 Brassicales-Malvales View MSA
124342247 5266 SBM View MSA
124242720 5268 Malvidae View MSA
124067782 5270 Rosid View MSA
123744269 5271 Pentapetalae View MSA
122787506 5272 Eudicot View MSA
122048070 5273 Angiosperm View MSA
123429167 5275 Viridiplantae View MSA
121348979 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain