Gene : Gorai.013G048600 G. raimondii v2.1
Defline:  (1 of 4) PTHR23321:SF31 - RIBULOSE BISPHOSPHATE CARBOXYLASE LARGE CHAIN-RELATED Genomic Order:  486
Name:  ? Gorai.013G048600 Secondary Identifier:  ? PAC:26787740
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CALVIN-PWY Gossypium raimondii pathologic  
Graimondii PHOTOALL-PWY Gossypium raimondii pathologic  
Graimondii PWY-5723 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G048600 0.5kb upstream 0.5kb upstream 1184 true Chr13: 4329278-4330461 Gossypium raimondii
Gorai.013G048600 0.5kb upstream 0.5kb upstream 500 false Chr13: 4329278-4329777 Gossypium raimondii
Gorai.013G048600 0.5kb downstream 0.5kb downstream 1184 true Chr13: 4329778-4330961 Gossypium raimondii
Gorai.013G048600 0.5kb downstream 0.5kb downstream 500 false Chr13: 4330462-4330961 Gossypium raimondii
Gorai.013G048600 1.0kb upstream 1.0kb upstream 1684 true Chr13: 4328778-4330461 Gossypium raimondii
Gorai.013G048600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 4328778-4329777 Gossypium raimondii
Gorai.013G048600 1.0kb downstream 1.0kb downstream 1684 true Chr13: 4329778-4331461 Gossypium raimondii
Gorai.013G048600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 4330462-4331461 Gossypium raimondii
Gorai.013G048600 2.0kb upstream 2.0kb upstream 2684 true Chr13: 4327778-4330461 Gossypium raimondii
Gorai.013G048600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 4327778-4329777 Gossypium raimondii
Gorai.013G048600 2.0kb downstream 2.0kb downstream 2684 true Chr13: 4329778-4332461 Gossypium raimondii
Gorai.013G048600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 4330462-4332461 Gossypium raimondii
Gorai.013G048600 5.0kb upstream 5.0kb upstream 5684 true Chr13: 4324778-4330461 Gossypium raimondii
Gorai.013G048600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 4324778-4329777 Gossypium raimondii
Gorai.013G048600 5.0kb downstream 5.0kb downstream 5684 true Chr13: 4329778-4335461 Gossypium raimondii
Gorai.013G048600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 4330462-4335461 Gossypium raimondii
Gorai.013G048600 10.0kb upstream 10.0kb upstream 10684 true Chr13: 4319778-4330461 Gossypium raimondii
Gorai.013G048600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 4319778-4329777 Gossypium raimondii
Gorai.013G048600 10.0kb downstream 10.0kb downstream 10684 true Chr13: 4329778-4340461 Gossypium raimondii
Gorai.013G048600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 4330462-4340461 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813841 5264 Brassicales-Malvales Singleton cluster - no MSA
124310358 5266 SBM Singleton cluster - no MSA
124159831 5268 Malvidae Singleton cluster - no MSA
123883993 5270 Rosid Singleton cluster - no MSA
123751375 5271 Pentapetalae View MSA
122794662 5272 Eudicot View MSA
122051262 5273 Angiosperm View MSA
121312381 5274 Embryophyte View MSA
123349558 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain