Gene : Gorai.013G080800 G. raimondii v2.1
Defline:  (1 of 5) PTHR12608 - TRANSMEMBRANE PROTEIN HTP-1 RELATED Genomic Order:  808
Name:  ? Gorai.013G080800 Secondary Identifier:  ? PAC:26787757
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G080800 0.5kb upstream 0.5kb upstream 4771 true Chr13: 11072007-11076777 Gossypium raimondii
Gorai.013G080800 0.5kb upstream 0.5kb upstream 500 false Chr13: 11072007-11072506 Gossypium raimondii
Gorai.013G080800 0.5kb downstream 0.5kb downstream 4771 true Chr13: 11072507-11077277 Gossypium raimondii
Gorai.013G080800 0.5kb downstream 0.5kb downstream 500 false Chr13: 11076778-11077277 Gossypium raimondii
Gorai.013G080800 1.0kb upstream 1.0kb upstream 5271 true Chr13: 11071507-11076777 Gossypium raimondii
Gorai.013G080800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 11071507-11072506 Gossypium raimondii
Gorai.013G080800 1.0kb downstream 1.0kb downstream 5271 true Chr13: 11072507-11077777 Gossypium raimondii
Gorai.013G080800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 11076778-11077777 Gossypium raimondii
Gorai.013G080800 2.0kb upstream 2.0kb upstream 6271 true Chr13: 11070507-11076777 Gossypium raimondii
Gorai.013G080800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 11070507-11072506 Gossypium raimondii
Gorai.013G080800 2.0kb downstream 2.0kb downstream 6271 true Chr13: 11072507-11078777 Gossypium raimondii
Gorai.013G080800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 11076778-11078777 Gossypium raimondii
Gorai.013G080800 5.0kb upstream 5.0kb upstream 9271 true Chr13: 11067507-11076777 Gossypium raimondii
Gorai.013G080800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 11067507-11072506 Gossypium raimondii
Gorai.013G080800 5.0kb downstream 5.0kb downstream 9271 true Chr13: 11072507-11081777 Gossypium raimondii
Gorai.013G080800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 11076778-11081777 Gossypium raimondii
Gorai.013G080800 10.0kb upstream 10.0kb upstream 14271 true Chr13: 11062507-11076777 Gossypium raimondii
Gorai.013G080800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 11062507-11072506 Gossypium raimondii
Gorai.013G080800 10.0kb downstream 10.0kb downstream 14271 true Chr13: 11072507-11086777 Gossypium raimondii
Gorai.013G080800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 11076778-11086777 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832499 5264 Brassicales-Malvales View MSA
124345020 5266 SBM View MSA
124245050 5268 Malvidae View MSA
124060465 5270 Rosid View MSA
123745262 5271 Pentapetalae View MSA
122786171 5272 Eudicot View MSA
122046225 5273 Angiosperm View MSA
121344721 5274 Embryophyte View MSA
123428725 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain