Gene : Gorai.013G145300 G. raimondii v2.1
Defline:  (1 of 1) PTHR21256:SF2 - HISTIDINE BIOSYNTHESIS TRIFUNCTIONAL PROTEIN Genomic Order:  1453
Name:  ? Gorai.013G145300 Secondary Identifier:  ? PAC:26789459
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii HISTSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G145300 0.5kb upstream 0.5kb upstream 6884 true Chr13: 39863376-39870259 Gossypium raimondii
Gorai.013G145300 0.5kb upstream 0.5kb upstream 500 false Chr13: 39869760-39870259 Gossypium raimondii
Gorai.013G145300 0.5kb downstream 0.5kb downstream 6884 true Chr13: 39862876-39869759 Gossypium raimondii
Gorai.013G145300 0.5kb downstream 0.5kb downstream 500 false Chr13: 39862876-39863375 Gossypium raimondii
Gorai.013G145300 1.0kb upstream 1.0kb upstream 7384 true Chr13: 39863376-39870759 Gossypium raimondii
Gorai.013G145300 1.0kb upstream 1.0kb upstream 1000 false Chr13: 39869760-39870759 Gossypium raimondii
Gorai.013G145300 1.0kb downstream 1.0kb downstream 7384 true Chr13: 39862376-39869759 Gossypium raimondii
Gorai.013G145300 1.0kb downstream 1.0kb downstream 1000 false Chr13: 39862376-39863375 Gossypium raimondii
Gorai.013G145300 2.0kb upstream 2.0kb upstream 8384 true Chr13: 39863376-39871759 Gossypium raimondii
Gorai.013G145300 2.0kb upstream 2.0kb upstream 2000 false Chr13: 39869760-39871759 Gossypium raimondii
Gorai.013G145300 2.0kb downstream 2.0kb downstream 8384 true Chr13: 39861376-39869759 Gossypium raimondii
Gorai.013G145300 2.0kb downstream 2.0kb downstream 2000 false Chr13: 39861376-39863375 Gossypium raimondii
Gorai.013G145300 5.0kb upstream 5.0kb upstream 11384 true Chr13: 39863376-39874759 Gossypium raimondii
Gorai.013G145300 5.0kb upstream 5.0kb upstream 5000 false Chr13: 39869760-39874759 Gossypium raimondii
Gorai.013G145300 5.0kb downstream 5.0kb downstream 11384 true Chr13: 39858376-39869759 Gossypium raimondii
Gorai.013G145300 5.0kb downstream 5.0kb downstream 5000 false Chr13: 39858376-39863375 Gossypium raimondii
Gorai.013G145300 10.0kb upstream 10.0kb upstream 16384 true Chr13: 39863376-39879759 Gossypium raimondii
Gorai.013G145300 10.0kb upstream 10.0kb upstream 10000 false Chr13: 39869760-39879759 Gossypium raimondii
Gorai.013G145300 10.0kb downstream 10.0kb downstream 16384 true Chr13: 39853376-39869759 Gossypium raimondii
Gorai.013G145300 10.0kb downstream 10.0kb downstream 10000 false Chr13: 39853376-39863375 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839930 5264 Brassicales-Malvales View MSA
124340813 5266 SBM View MSA
124241188 5268 Malvidae View MSA
124061664 5270 Rosid View MSA
123738837 5271 Pentapetalae View MSA
122785994 5272 Eudicot View MSA
122046994 5273 Angiosperm View MSA
121351553 5274 Embryophyte View MSA
123424167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain