Gene : Gorai.013G018900 G. raimondii v2.1
Defline:  (1 of 6) PTHR22950:SF256 - AUXIN TRANSPORTER PROTEIN 1-RELATED Genomic Order:  189
Name:  ? Gorai.013G018900 Secondary Identifier:  ? PAC:26786168
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G018900 0.5kb upstream 0.5kb upstream 3408 true Chr13: 1300558-1303965 Gossypium raimondii
Gorai.013G018900 0.5kb upstream 0.5kb upstream 500 false Chr13: 1303466-1303965 Gossypium raimondii
Gorai.013G018900 0.5kb downstream 0.5kb downstream 3408 true Chr13: 1300058-1303465 Gossypium raimondii
Gorai.013G018900 0.5kb downstream 0.5kb downstream 500 false Chr13: 1300058-1300557 Gossypium raimondii
Gorai.013G018900 1.0kb upstream 1.0kb upstream 3908 true Chr13: 1300558-1304465 Gossypium raimondii
Gorai.013G018900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1303466-1304465 Gossypium raimondii
Gorai.013G018900 1.0kb downstream 1.0kb downstream 3908 true Chr13: 1299558-1303465 Gossypium raimondii
Gorai.013G018900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1299558-1300557 Gossypium raimondii
Gorai.013G018900 2.0kb upstream 2.0kb upstream 4908 true Chr13: 1300558-1305465 Gossypium raimondii
Gorai.013G018900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1303466-1305465 Gossypium raimondii
Gorai.013G018900 2.0kb downstream 2.0kb downstream 4908 true Chr13: 1298558-1303465 Gossypium raimondii
Gorai.013G018900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1298558-1300557 Gossypium raimondii
Gorai.013G018900 5.0kb upstream 5.0kb upstream 7908 true Chr13: 1300558-1308465 Gossypium raimondii
Gorai.013G018900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1303466-1308465 Gossypium raimondii
Gorai.013G018900 5.0kb downstream 5.0kb downstream 7908 true Chr13: 1295558-1303465 Gossypium raimondii
Gorai.013G018900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1295558-1300557 Gossypium raimondii
Gorai.013G018900 10.0kb upstream 10.0kb upstream 12908 true Chr13: 1300558-1313465 Gossypium raimondii
Gorai.013G018900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1303466-1313465 Gossypium raimondii
Gorai.013G018900 10.0kb downstream 10.0kb downstream 12908 true Chr13: 1290558-1303465 Gossypium raimondii
Gorai.013G018900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1290558-1300557 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813602 5264 Brassicales-Malvales Singleton cluster - no MSA
124310127 5266 SBM Singleton cluster - no MSA
124253197 5268 Malvidae View MSA
124073275 5270 Rosid View MSA
123753033 5271 Pentapetalae View MSA
122796609 5272 Eudicot View MSA
122045744 5273 Angiosperm View MSA
121347395 5274 Embryophyte View MSA
123427582 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain