Gene : Gorai.013G241900 G. raimondii v2.1
Defline:  (1 of 10) 5.4.99.8 - Cycloartenol synthase / 2,3-epoxysqualene--cycloartenol cyclase Genomic Order:  2419
Name:  ? Gorai.013G241900 Secondary Identifier:  ? PAC:26787268
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-2541 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G241900 0.5kb upstream 0.5kb upstream 10297 true Chr13: 56101484-56111780 Gossypium raimondii
Gorai.013G241900 0.5kb upstream 0.5kb upstream 500 false Chr13: 56111281-56111780 Gossypium raimondii
Gorai.013G241900 0.5kb downstream 0.5kb downstream 10297 true Chr13: 56100984-56111280 Gossypium raimondii
Gorai.013G241900 0.5kb downstream 0.5kb downstream 500 false Chr13: 56100984-56101483 Gossypium raimondii
Gorai.013G241900 1.0kb upstream 1.0kb upstream 10797 true Chr13: 56101484-56112280 Gossypium raimondii
Gorai.013G241900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 56111281-56112280 Gossypium raimondii
Gorai.013G241900 1.0kb downstream 1.0kb downstream 10797 true Chr13: 56100484-56111280 Gossypium raimondii
Gorai.013G241900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 56100484-56101483 Gossypium raimondii
Gorai.013G241900 2.0kb upstream 2.0kb upstream 11797 true Chr13: 56101484-56113280 Gossypium raimondii
Gorai.013G241900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 56111281-56113280 Gossypium raimondii
Gorai.013G241900 2.0kb downstream 2.0kb downstream 11797 true Chr13: 56099484-56111280 Gossypium raimondii
Gorai.013G241900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 56099484-56101483 Gossypium raimondii
Gorai.013G241900 5.0kb upstream 5.0kb upstream 14797 true Chr13: 56101484-56116280 Gossypium raimondii
Gorai.013G241900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 56111281-56116280 Gossypium raimondii
Gorai.013G241900 5.0kb downstream 5.0kb downstream 14797 true Chr13: 56096484-56111280 Gossypium raimondii
Gorai.013G241900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 56096484-56101483 Gossypium raimondii
Gorai.013G241900 10.0kb upstream 10.0kb upstream 19797 true Chr13: 56101484-56121280 Gossypium raimondii
Gorai.013G241900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 56111281-56121280 Gossypium raimondii
Gorai.013G241900 10.0kb downstream 10.0kb downstream 19797 true Chr13: 56091484-56111280 Gossypium raimondii
Gorai.013G241900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 56091484-56101483 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813783 5264 Brassicales-Malvales Singleton cluster - no MSA
124310303 5266 SBM Singleton cluster - no MSA
124253779 5268 Malvidae View MSA
124061853 5270 Rosid View MSA
123750129 5271 Pentapetalae View MSA
122795524 5272 Eudicot View MSA
122043543 5273 Angiosperm View MSA
121345283 5274 Embryophyte View MSA
123424991 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain