Gene : Gorai.005G092600 G. raimondii v2.1
Defline:  (1 of 1) KOG0978//KOG0993 - E3 ubiquitin ligase involved in syntaxin degradation // Rab5 GTPase effector Rabaptin-5 Genomic Order:  926
Name:  ? Gorai.005G092600 Secondary Identifier:  ? PAC:26805947
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G092600 0.5kb upstream 0.5kb upstream 16583 true Chr05: 12697493-12714075 Gossypium raimondii
Gorai.005G092600 0.5kb upstream 0.5kb upstream 500 false Chr05: 12697493-12697992 Gossypium raimondii
Gorai.005G092600 0.5kb downstream 0.5kb downstream 16583 true Chr05: 12697993-12714575 Gossypium raimondii
Gorai.005G092600 0.5kb downstream 0.5kb downstream 500 false Chr05: 12714076-12714575 Gossypium raimondii
Gorai.005G092600 1.0kb upstream 1.0kb upstream 17083 true Chr05: 12696993-12714075 Gossypium raimondii
Gorai.005G092600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 12696993-12697992 Gossypium raimondii
Gorai.005G092600 1.0kb downstream 1.0kb downstream 17083 true Chr05: 12697993-12715075 Gossypium raimondii
Gorai.005G092600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 12714076-12715075 Gossypium raimondii
Gorai.005G092600 2.0kb upstream 2.0kb upstream 18083 true Chr05: 12695993-12714075 Gossypium raimondii
Gorai.005G092600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 12695993-12697992 Gossypium raimondii
Gorai.005G092600 2.0kb downstream 2.0kb downstream 18083 true Chr05: 12697993-12716075 Gossypium raimondii
Gorai.005G092600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 12714076-12716075 Gossypium raimondii
Gorai.005G092600 5.0kb upstream 5.0kb upstream 21083 true Chr05: 12692993-12714075 Gossypium raimondii
Gorai.005G092600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 12692993-12697992 Gossypium raimondii
Gorai.005G092600 5.0kb downstream 5.0kb downstream 21083 true Chr05: 12697993-12719075 Gossypium raimondii
Gorai.005G092600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 12714076-12719075 Gossypium raimondii
Gorai.005G092600 10.0kb upstream 10.0kb upstream 26083 true Chr05: 12687993-12714075 Gossypium raimondii
Gorai.005G092600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 12687993-12697992 Gossypium raimondii
Gorai.005G092600 10.0kb downstream 10.0kb downstream 26083 true Chr05: 12697993-12724075 Gossypium raimondii
Gorai.005G092600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 12714076-12724075 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807509 5264 Brassicales-Malvales Singleton cluster - no MSA
124304372 5266 SBM Singleton cluster - no MSA
124154898 5268 Malvidae Singleton cluster - no MSA
123879795 5270 Rosid Singleton cluster - no MSA
123751263 5271 Pentapetalae View MSA
122794773 5272 Eudicot View MSA
122048313 5273 Angiosperm View MSA
121348283 5274 Embryophyte View MSA
123428094 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain