Gene : Gorai.013G109800 G. raimondii v2.1
Defline:  (1 of 7) PTHR23023:SF37 - INDOLE-3-PYRUVATE MONOOXYGENASE YUCCA2-RELATED Genomic Order:  1098
Name:  ? Gorai.013G109800 Secondary Identifier:  ? PAC:26788408
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWYDQC-4 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G109800 0.5kb upstream 0.5kb upstream 2920 true Chr13: 24694006-24696925 Gossypium raimondii
Gorai.013G109800 0.5kb upstream 0.5kb upstream 500 false Chr13: 24696426-24696925 Gossypium raimondii
Gorai.013G109800 0.5kb downstream 0.5kb downstream 2920 true Chr13: 24693506-24696425 Gossypium raimondii
Gorai.013G109800 0.5kb downstream 0.5kb downstream 500 false Chr13: 24693506-24694005 Gossypium raimondii
Gorai.013G109800 1.0kb upstream 1.0kb upstream 3420 true Chr13: 24694006-24697425 Gossypium raimondii
Gorai.013G109800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 24696426-24697425 Gossypium raimondii
Gorai.013G109800 1.0kb downstream 1.0kb downstream 3420 true Chr13: 24693006-24696425 Gossypium raimondii
Gorai.013G109800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 24693006-24694005 Gossypium raimondii
Gorai.013G109800 2.0kb upstream 2.0kb upstream 4420 true Chr13: 24694006-24698425 Gossypium raimondii
Gorai.013G109800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 24696426-24698425 Gossypium raimondii
Gorai.013G109800 2.0kb downstream 2.0kb downstream 4420 true Chr13: 24692006-24696425 Gossypium raimondii
Gorai.013G109800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 24692006-24694005 Gossypium raimondii
Gorai.013G109800 5.0kb upstream 5.0kb upstream 7420 true Chr13: 24694006-24701425 Gossypium raimondii
Gorai.013G109800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 24696426-24701425 Gossypium raimondii
Gorai.013G109800 5.0kb downstream 5.0kb downstream 7420 true Chr13: 24689006-24696425 Gossypium raimondii
Gorai.013G109800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 24689006-24694005 Gossypium raimondii
Gorai.013G109800 10.0kb upstream 10.0kb upstream 12420 true Chr13: 24694006-24706425 Gossypium raimondii
Gorai.013G109800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 24696426-24706425 Gossypium raimondii
Gorai.013G109800 10.0kb downstream 10.0kb downstream 12420 true Chr13: 24684006-24696425 Gossypium raimondii
Gorai.013G109800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 24684006-24694005 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123841606 5264 Brassicales-Malvales View MSA
124345129 5266 SBM View MSA
124252107 5268 Malvidae View MSA
124066807 5270 Rosid View MSA
123736759 5271 Pentapetalae View MSA
122792944 5272 Eudicot View MSA
122049474 5273 Angiosperm View MSA
121351632 5274 Embryophyte View MSA
123426700 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain