Gene : Gorai.013G111600 G. raimondii v2.1
Defline:  (1 of 5) PTHR11685:SF154 - E3 UBIQUITIN-PROTEIN LIGASE ARI5-RELATED Genomic Order:  1116
Name:  ? Gorai.013G111600 Secondary Identifier:  ? PAC:26790884
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G111600 0.5kb upstream 0.5kb upstream 13638 true Chr13: 26200686-26214323 Gossypium raimondii
Gorai.013G111600 0.5kb upstream 0.5kb upstream 500 false Chr13: 26200686-26201185 Gossypium raimondii
Gorai.013G111600 0.5kb downstream 0.5kb downstream 13638 true Chr13: 26201186-26214823 Gossypium raimondii
Gorai.013G111600 0.5kb downstream 0.5kb downstream 500 false Chr13: 26214324-26214823 Gossypium raimondii
Gorai.013G111600 1.0kb upstream 1.0kb upstream 14138 true Chr13: 26200186-26214323 Gossypium raimondii
Gorai.013G111600 1.0kb upstream 1.0kb upstream 1000 false Chr13: 26200186-26201185 Gossypium raimondii
Gorai.013G111600 1.0kb downstream 1.0kb downstream 14138 true Chr13: 26201186-26215323 Gossypium raimondii
Gorai.013G111600 1.0kb downstream 1.0kb downstream 1000 false Chr13: 26214324-26215323 Gossypium raimondii
Gorai.013G111600 2.0kb upstream 2.0kb upstream 15138 true Chr13: 26199186-26214323 Gossypium raimondii
Gorai.013G111600 2.0kb upstream 2.0kb upstream 2000 false Chr13: 26199186-26201185 Gossypium raimondii
Gorai.013G111600 2.0kb downstream 2.0kb downstream 15138 true Chr13: 26201186-26216323 Gossypium raimondii
Gorai.013G111600 2.0kb downstream 2.0kb downstream 2000 false Chr13: 26214324-26216323 Gossypium raimondii
Gorai.013G111600 5.0kb upstream 5.0kb upstream 18138 true Chr13: 26196186-26214323 Gossypium raimondii
Gorai.013G111600 5.0kb upstream 5.0kb upstream 5000 false Chr13: 26196186-26201185 Gossypium raimondii
Gorai.013G111600 5.0kb downstream 5.0kb downstream 18138 true Chr13: 26201186-26219323 Gossypium raimondii
Gorai.013G111600 5.0kb downstream 5.0kb downstream 5000 false Chr13: 26214324-26219323 Gossypium raimondii
Gorai.013G111600 10.0kb upstream 10.0kb upstream 23138 true Chr13: 26191186-26214323 Gossypium raimondii
Gorai.013G111600 10.0kb upstream 10.0kb upstream 10000 false Chr13: 26191186-26201185 Gossypium raimondii
Gorai.013G111600 10.0kb downstream 10.0kb downstream 23138 true Chr13: 26201186-26224323 Gossypium raimondii
Gorai.013G111600 10.0kb downstream 10.0kb downstream 10000 false Chr13: 26214324-26224323 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831076 5264 Brassicales-Malvales View MSA
124348050 5266 SBM View MSA
124248365 5268 Malvidae View MSA
124071269 5270 Rosid View MSA
123742457 5271 Pentapetalae View MSA
122787924 5272 Eudicot View MSA
122045508 5273 Angiosperm View MSA
121343931 5274 Embryophyte View MSA
123428000 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain