Gene : Gorai.013G005700 G. raimondii v2.1
Defline:  (1 of 2) PTHR10315:SF45 - E3 UBIQUITIN-PROTEIN LIGASE Genomic Order:  57
Name:  ? Gorai.013G005700 Secondary Identifier:  ? PAC:26786056
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G005700 0.5kb upstream 0.5kb upstream 3528 true Chr13: 401770-405297 Gossypium raimondii
Gorai.013G005700 0.5kb upstream 0.5kb upstream 500 false Chr13: 401770-402269 Gossypium raimondii
Gorai.013G005700 0.5kb downstream 0.5kb downstream 3528 true Chr13: 402270-405797 Gossypium raimondii
Gorai.013G005700 0.5kb downstream 0.5kb downstream 500 false Chr13: 405298-405797 Gossypium raimondii
Gorai.013G005700 1.0kb upstream 1.0kb upstream 4028 true Chr13: 401270-405297 Gossypium raimondii
Gorai.013G005700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 401270-402269 Gossypium raimondii
Gorai.013G005700 1.0kb downstream 1.0kb downstream 4028 true Chr13: 402270-406297 Gossypium raimondii
Gorai.013G005700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 405298-406297 Gossypium raimondii
Gorai.013G005700 2.0kb upstream 2.0kb upstream 5028 true Chr13: 400270-405297 Gossypium raimondii
Gorai.013G005700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 400270-402269 Gossypium raimondii
Gorai.013G005700 2.0kb downstream 2.0kb downstream 5028 true Chr13: 402270-407297 Gossypium raimondii
Gorai.013G005700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 405298-407297 Gossypium raimondii
Gorai.013G005700 5.0kb upstream 5.0kb upstream 8028 true Chr13: 397270-405297 Gossypium raimondii
Gorai.013G005700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 397270-402269 Gossypium raimondii
Gorai.013G005700 5.0kb downstream 5.0kb downstream 8028 true Chr13: 402270-410297 Gossypium raimondii
Gorai.013G005700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 405298-410297 Gossypium raimondii
Gorai.013G005700 10.0kb upstream 10.0kb upstream 13028 true Chr13: 392270-405297 Gossypium raimondii
Gorai.013G005700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 392270-402269 Gossypium raimondii
Gorai.013G005700 10.0kb downstream 10.0kb downstream 13028 true Chr13: 402270-415297 Gossypium raimondii
Gorai.013G005700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 405298-415297 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123826653 5264 Brassicales-Malvales View MSA
124348970 5266 SBM View MSA
124246222 5268 Malvidae View MSA
124072834 5270 Rosid View MSA
123746623 5271 Pentapetalae View MSA
122796827 5272 Eudicot View MSA
122050638 5273 Angiosperm View MSA
121350928 5274 Embryophyte View MSA
123381939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain