Gene : Gorai.013G255400 G. raimondii v2.1
Defline:  (1 of 2) 4.6.1.16 - tRNA-intron lyase / tRNA splicing endonuclease Genomic Order:  2554
Name:  ? Gorai.013G255400 Secondary Identifier:  ? PAC:26789300
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6689 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G255400 0.5kb upstream 0.5kb upstream 2480 true Chr13: 57194240-57196719 Gossypium raimondii
Gorai.013G255400 0.5kb upstream 0.5kb upstream 500 false Chr13: 57196220-57196719 Gossypium raimondii
Gorai.013G255400 0.5kb downstream 0.5kb downstream 2480 true Chr13: 57193740-57196219 Gossypium raimondii
Gorai.013G255400 0.5kb downstream 0.5kb downstream 500 false Chr13: 57193740-57194239 Gossypium raimondii
Gorai.013G255400 1.0kb upstream 1.0kb upstream 2980 true Chr13: 57194240-57197219 Gossypium raimondii
Gorai.013G255400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 57196220-57197219 Gossypium raimondii
Gorai.013G255400 1.0kb downstream 1.0kb downstream 2980 true Chr13: 57193240-57196219 Gossypium raimondii
Gorai.013G255400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 57193240-57194239 Gossypium raimondii
Gorai.013G255400 2.0kb upstream 2.0kb upstream 3980 true Chr13: 57194240-57198219 Gossypium raimondii
Gorai.013G255400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 57196220-57198219 Gossypium raimondii
Gorai.013G255400 2.0kb downstream 2.0kb downstream 3980 true Chr13: 57192240-57196219 Gossypium raimondii
Gorai.013G255400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 57192240-57194239 Gossypium raimondii
Gorai.013G255400 5.0kb upstream 5.0kb upstream 6980 true Chr13: 57194240-57201219 Gossypium raimondii
Gorai.013G255400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 57196220-57201219 Gossypium raimondii
Gorai.013G255400 5.0kb downstream 5.0kb downstream 6980 true Chr13: 57189240-57196219 Gossypium raimondii
Gorai.013G255400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 57189240-57194239 Gossypium raimondii
Gorai.013G255400 10.0kb upstream 10.0kb upstream 11980 true Chr13: 57194240-57206219 Gossypium raimondii
Gorai.013G255400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 57196220-57206219 Gossypium raimondii
Gorai.013G255400 10.0kb downstream 10.0kb downstream 11980 true Chr13: 57184240-57196219 Gossypium raimondii
Gorai.013G255400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 57184240-57194239 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121517871 5273 Angiosperm Singleton cluster - no MSA
123814053 5264 Brassicales-Malvales Singleton cluster - no MSA
124310562 5266 SBM Singleton cluster - no MSA
124159994 5268 Malvidae Singleton cluster - no MSA
123884130 5270 Rosid Singleton cluster - no MSA
123466804 5271 Pentapetalae Singleton cluster - no MSA
122502108 5272 Eudicot Singleton cluster - no MSA
120790706 5274 Embryophyte Singleton cluster - no MSA
122832341 5275 Viridiplantae Singleton cluster - no MSA

0 Rna Seq Expressions

0 Strain