Gene : Gorai.013G154200 G. raimondii v2.1
Defline:  (1 of 2) PTHR23416:SF56 - SERINE ACETYLTRANSFERASE 1, CHLOROPLASTIC-RELATED Genomic Order:  1542
Name:  ? Gorai.013G154200 Secondary Identifier:  ? PAC:26788406
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii CYSTSYN-PWY Gossypium raimondii pathologic  
Graimondii PWY-6936 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G154200 0.5kb upstream 0.5kb upstream 2598 true Chr13: 42329953-42332550 Gossypium raimondii
Gorai.013G154200 0.5kb upstream 0.5kb upstream 500 false Chr13: 42329953-42330452 Gossypium raimondii
Gorai.013G154200 0.5kb downstream 0.5kb downstream 2598 true Chr13: 42330453-42333050 Gossypium raimondii
Gorai.013G154200 0.5kb downstream 0.5kb downstream 500 false Chr13: 42332551-42333050 Gossypium raimondii
Gorai.013G154200 1.0kb upstream 1.0kb upstream 3098 true Chr13: 42329453-42332550 Gossypium raimondii
Gorai.013G154200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 42329453-42330452 Gossypium raimondii
Gorai.013G154200 1.0kb downstream 1.0kb downstream 3098 true Chr13: 42330453-42333550 Gossypium raimondii
Gorai.013G154200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 42332551-42333550 Gossypium raimondii
Gorai.013G154200 2.0kb upstream 2.0kb upstream 4098 true Chr13: 42328453-42332550 Gossypium raimondii
Gorai.013G154200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 42328453-42330452 Gossypium raimondii
Gorai.013G154200 2.0kb downstream 2.0kb downstream 4098 true Chr13: 42330453-42334550 Gossypium raimondii
Gorai.013G154200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 42332551-42334550 Gossypium raimondii
Gorai.013G154200 5.0kb upstream 5.0kb upstream 7098 true Chr13: 42325453-42332550 Gossypium raimondii
Gorai.013G154200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 42325453-42330452 Gossypium raimondii
Gorai.013G154200 5.0kb downstream 5.0kb downstream 7098 true Chr13: 42330453-42337550 Gossypium raimondii
Gorai.013G154200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 42332551-42337550 Gossypium raimondii
Gorai.013G154200 10.0kb upstream 10.0kb upstream 12098 true Chr13: 42320453-42332550 Gossypium raimondii
Gorai.013G154200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 42320453-42330452 Gossypium raimondii
Gorai.013G154200 10.0kb downstream 10.0kb downstream 12098 true Chr13: 42330453-42342550 Gossypium raimondii
Gorai.013G154200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 42332551-42342550 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835018 5264 Brassicales-Malvales View MSA
124338786 5266 SBM View MSA
124238162 5268 Malvidae View MSA
124069334 5270 Rosid View MSA
123751427 5271 Pentapetalae View MSA
122788280 5272 Eudicot View MSA
122045055 5273 Angiosperm View MSA
121348374 5274 Embryophyte View MSA
123426625 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain