Gene : Gorai.013G202900 G. raimondii v2.1
Defline:  (1 of 3) PTHR10126 - TATA-BOX BINDING PROTEIN Genomic Order:  2029
Name:  ? Gorai.013G202900 Secondary Identifier:  ? PAC:26786984
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G202900 0.5kb upstream 0.5kb upstream 7988 true Chr13: 51387117-51395104 Gossypium raimondii
Gorai.013G202900 0.5kb upstream 0.5kb upstream 500 false Chr13: 51394605-51395104 Gossypium raimondii
Gorai.013G202900 0.5kb downstream 0.5kb downstream 7988 true Chr13: 51386617-51394604 Gossypium raimondii
Gorai.013G202900 0.5kb downstream 0.5kb downstream 500 false Chr13: 51386617-51387116 Gossypium raimondii
Gorai.013G202900 1.0kb upstream 1.0kb upstream 8488 true Chr13: 51387117-51395604 Gossypium raimondii
Gorai.013G202900 1.0kb upstream 1.0kb upstream 1000 false Chr13: 51394605-51395604 Gossypium raimondii
Gorai.013G202900 1.0kb downstream 1.0kb downstream 8488 true Chr13: 51386117-51394604 Gossypium raimondii
Gorai.013G202900 1.0kb downstream 1.0kb downstream 1000 false Chr13: 51386117-51387116 Gossypium raimondii
Gorai.013G202900 2.0kb upstream 2.0kb upstream 9488 true Chr13: 51387117-51396604 Gossypium raimondii
Gorai.013G202900 2.0kb upstream 2.0kb upstream 2000 false Chr13: 51394605-51396604 Gossypium raimondii
Gorai.013G202900 2.0kb downstream 2.0kb downstream 9488 true Chr13: 51385117-51394604 Gossypium raimondii
Gorai.013G202900 2.0kb downstream 2.0kb downstream 2000 false Chr13: 51385117-51387116 Gossypium raimondii
Gorai.013G202900 5.0kb upstream 5.0kb upstream 12488 true Chr13: 51387117-51399604 Gossypium raimondii
Gorai.013G202900 5.0kb upstream 5.0kb upstream 5000 false Chr13: 51394605-51399604 Gossypium raimondii
Gorai.013G202900 5.0kb downstream 5.0kb downstream 12488 true Chr13: 51382117-51394604 Gossypium raimondii
Gorai.013G202900 5.0kb downstream 5.0kb downstream 5000 false Chr13: 51382117-51387116 Gossypium raimondii
Gorai.013G202900 10.0kb upstream 10.0kb upstream 17488 true Chr13: 51387117-51404604 Gossypium raimondii
Gorai.013G202900 10.0kb upstream 10.0kb upstream 10000 false Chr13: 51394605-51404604 Gossypium raimondii
Gorai.013G202900 10.0kb downstream 10.0kb downstream 17488 true Chr13: 51377117-51394604 Gossypium raimondii
Gorai.013G202900 10.0kb downstream 10.0kb downstream 10000 false Chr13: 51377117-51387116 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813735 5264 Brassicales-Malvales Singleton cluster - no MSA
124310256 5266 SBM Singleton cluster - no MSA
124159744 5268 Malvidae Singleton cluster - no MSA
123883919 5270 Rosid Singleton cluster - no MSA
123751574 5271 Pentapetalae View MSA
122793638 5272 Eudicot View MSA
122046126 5273 Angiosperm View MSA
123429185 5275 Viridiplantae View MSA
121349658 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain