Gene : Gorai.013G090700 G. raimondii v2.1
Defline:  (1 of 5) 5.4.99.5 - Chorismate mutase / Hydroxyphenylpyruvate synthase Genomic Order:  907
Name:  ? Gorai.013G090700 Secondary Identifier:  ? PAC:26786070
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3461 Gossypium raimondii pathologic  
Graimondii PWY-3462 Gossypium raimondii pathologic  
Graimondii PWY-3481 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G090700 0.5kb upstream 0.5kb upstream 3960 true Chr13: 14533560-14537519 Gossypium raimondii
Gorai.013G090700 0.5kb upstream 0.5kb upstream 500 false Chr13: 14537020-14537519 Gossypium raimondii
Gorai.013G090700 0.5kb downstream 0.5kb downstream 3960 true Chr13: 14533060-14537019 Gossypium raimondii
Gorai.013G090700 0.5kb downstream 0.5kb downstream 500 false Chr13: 14533060-14533559 Gossypium raimondii
Gorai.013G090700 1.0kb upstream 1.0kb upstream 4460 true Chr13: 14533560-14538019 Gossypium raimondii
Gorai.013G090700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 14537020-14538019 Gossypium raimondii
Gorai.013G090700 1.0kb downstream 1.0kb downstream 4460 true Chr13: 14532560-14537019 Gossypium raimondii
Gorai.013G090700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 14532560-14533559 Gossypium raimondii
Gorai.013G090700 2.0kb upstream 2.0kb upstream 5460 true Chr13: 14533560-14539019 Gossypium raimondii
Gorai.013G090700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 14537020-14539019 Gossypium raimondii
Gorai.013G090700 2.0kb downstream 2.0kb downstream 5460 true Chr13: 14531560-14537019 Gossypium raimondii
Gorai.013G090700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 14531560-14533559 Gossypium raimondii
Gorai.013G090700 5.0kb upstream 5.0kb upstream 8460 true Chr13: 14533560-14542019 Gossypium raimondii
Gorai.013G090700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 14537020-14542019 Gossypium raimondii
Gorai.013G090700 5.0kb downstream 5.0kb downstream 8460 true Chr13: 14528560-14537019 Gossypium raimondii
Gorai.013G090700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 14528560-14533559 Gossypium raimondii
Gorai.013G090700 10.0kb upstream 10.0kb upstream 13460 true Chr13: 14533560-14547019 Gossypium raimondii
Gorai.013G090700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 14537020-14547019 Gossypium raimondii
Gorai.013G090700 10.0kb downstream 10.0kb downstream 13460 true Chr13: 14523560-14537019 Gossypium raimondii
Gorai.013G090700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 14523560-14533559 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041201 5273 Angiosperm View MSA
123835152 5264 Brassicales-Malvales View MSA
124322009 5266 SBM View MSA
124252605 5268 Malvidae View MSA
124071158 5270 Rosid View MSA
123736644 5271 Pentapetalae View MSA
122792454 5272 Eudicot View MSA
121347234 5274 Embryophyte View MSA
123427559 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain