Gene : Gorai.013G116800 G. raimondii v2.1
Defline:  (1 of 6) PTHR10003 - SUPEROXIDE DISMUTASE CU-ZN -RELATED Genomic Order:  1168
Name:  ? Gorai.013G116800 Secondary Identifier:  ? PAC:26789227
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii DETOX1-PWY Gossypium raimondii pathologic  
Graimondii DETOX1-PWY-1 Gossypium raimondii pathologic  
Graimondii PWY-6854 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G116800 0.5kb upstream 0.5kb upstream 3714 true Chr13: 28906941-28910654 Gossypium raimondii
Gorai.013G116800 0.5kb upstream 0.5kb upstream 500 false Chr13: 28910155-28910654 Gossypium raimondii
Gorai.013G116800 0.5kb downstream 0.5kb downstream 3714 true Chr13: 28906441-28910154 Gossypium raimondii
Gorai.013G116800 0.5kb downstream 0.5kb downstream 500 false Chr13: 28906441-28906940 Gossypium raimondii
Gorai.013G116800 1.0kb upstream 1.0kb upstream 4214 true Chr13: 28906941-28911154 Gossypium raimondii
Gorai.013G116800 1.0kb upstream 1.0kb upstream 1000 false Chr13: 28910155-28911154 Gossypium raimondii
Gorai.013G116800 1.0kb downstream 1.0kb downstream 4214 true Chr13: 28905941-28910154 Gossypium raimondii
Gorai.013G116800 1.0kb downstream 1.0kb downstream 1000 false Chr13: 28905941-28906940 Gossypium raimondii
Gorai.013G116800 2.0kb upstream 2.0kb upstream 5214 true Chr13: 28906941-28912154 Gossypium raimondii
Gorai.013G116800 2.0kb upstream 2.0kb upstream 2000 false Chr13: 28910155-28912154 Gossypium raimondii
Gorai.013G116800 2.0kb downstream 2.0kb downstream 5214 true Chr13: 28904941-28910154 Gossypium raimondii
Gorai.013G116800 2.0kb downstream 2.0kb downstream 2000 false Chr13: 28904941-28906940 Gossypium raimondii
Gorai.013G116800 5.0kb upstream 5.0kb upstream 8214 true Chr13: 28906941-28915154 Gossypium raimondii
Gorai.013G116800 5.0kb upstream 5.0kb upstream 5000 false Chr13: 28910155-28915154 Gossypium raimondii
Gorai.013G116800 5.0kb downstream 5.0kb downstream 8214 true Chr13: 28901941-28910154 Gossypium raimondii
Gorai.013G116800 5.0kb downstream 5.0kb downstream 5000 false Chr13: 28901941-28906940 Gossypium raimondii
Gorai.013G116800 10.0kb upstream 10.0kb upstream 13214 true Chr13: 28906941-28920154 Gossypium raimondii
Gorai.013G116800 10.0kb upstream 10.0kb upstream 10000 false Chr13: 28910155-28920154 Gossypium raimondii
Gorai.013G116800 10.0kb downstream 10.0kb downstream 13214 true Chr13: 28896941-28910154 Gossypium raimondii
Gorai.013G116800 10.0kb downstream 10.0kb downstream 10000 false Chr13: 28896941-28906940 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835186 5264 Brassicales-Malvales View MSA
124350361 5266 SBM View MSA
124238216 5268 Malvidae View MSA
124071759 5270 Rosid View MSA
123743890 5271 Pentapetalae View MSA
122797763 5272 Eudicot View MSA
122047736 5273 Angiosperm View MSA
121347419 5274 Embryophyte View MSA
123427939 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain