Gene : Gorai.013G119400 G. raimondii v2.1
Defline:  (1 of 18) PF03108 - MuDR family transposase (DBD_Tnp_Mut) Genomic Order:  1194
Name:  ? Gorai.013G119400 Secondary Identifier:  ? PAC:26787982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G119400 0.5kb upstream 0.5kb upstream 2242 true Chr13: 29749646-29751887 Gossypium raimondii
Gorai.013G119400 0.5kb upstream 0.5kb upstream 500 false Chr13: 29751388-29751887 Gossypium raimondii
Gorai.013G119400 0.5kb downstream 0.5kb downstream 2242 true Chr13: 29749146-29751387 Gossypium raimondii
Gorai.013G119400 0.5kb downstream 0.5kb downstream 500 false Chr13: 29749146-29749645 Gossypium raimondii
Gorai.013G119400 1.0kb upstream 1.0kb upstream 2742 true Chr13: 29749646-29752387 Gossypium raimondii
Gorai.013G119400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 29751388-29752387 Gossypium raimondii
Gorai.013G119400 1.0kb downstream 1.0kb downstream 2742 true Chr13: 29748646-29751387 Gossypium raimondii
Gorai.013G119400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 29748646-29749645 Gossypium raimondii
Gorai.013G119400 2.0kb upstream 2.0kb upstream 3742 true Chr13: 29749646-29753387 Gossypium raimondii
Gorai.013G119400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 29751388-29753387 Gossypium raimondii
Gorai.013G119400 2.0kb downstream 2.0kb downstream 3742 true Chr13: 29747646-29751387 Gossypium raimondii
Gorai.013G119400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 29747646-29749645 Gossypium raimondii
Gorai.013G119400 5.0kb upstream 5.0kb upstream 6742 true Chr13: 29749646-29756387 Gossypium raimondii
Gorai.013G119400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 29751388-29756387 Gossypium raimondii
Gorai.013G119400 5.0kb downstream 5.0kb downstream 6742 true Chr13: 29744646-29751387 Gossypium raimondii
Gorai.013G119400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 29744646-29749645 Gossypium raimondii
Gorai.013G119400 10.0kb upstream 10.0kb upstream 11742 true Chr13: 29749646-29761387 Gossypium raimondii
Gorai.013G119400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 29751388-29761387 Gossypium raimondii
Gorai.013G119400 10.0kb downstream 10.0kb downstream 11742 true Chr13: 29739646-29751387 Gossypium raimondii
Gorai.013G119400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 29739646-29749645 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827211 5264 Brassicales-Malvales View MSA
124321377 5266 SBM View MSA
124169004 5268 Malvidae View MSA
124051474 5270 Rosid View MSA
123753345 5271 Pentapetalae View MSA
122797917 5272 Eudicot View MSA
122051679 5273 Angiosperm View MSA
121351767 5274 Embryophyte View MSA
123382313 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain