Gene : Gorai.013G213200 G. raimondii v2.1
Defline:  (1 of 2) PTHR11403 - CYTOCHROME C OXIDASE SUBUNIT III Genomic Order:  2132
Name:  ? Gorai.013G213200 Secondary Identifier:  ? PAC:26786805
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-3781 Gossypium raimondii pathologic  
Graimondii PWY-7279 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G213200 0.5kb upstream 0.5kb upstream 1481 true Chr13: 52745687-52747167 Gossypium raimondii
Gorai.013G213200 0.5kb upstream 0.5kb upstream 500 false Chr13: 52745687-52746186 Gossypium raimondii
Gorai.013G213200 0.5kb downstream 0.5kb downstream 1481 true Chr13: 52746187-52747667 Gossypium raimondii
Gorai.013G213200 0.5kb downstream 0.5kb downstream 500 false Chr13: 52747168-52747667 Gossypium raimondii
Gorai.013G213200 1.0kb upstream 1.0kb upstream 1981 true Chr13: 52745187-52747167 Gossypium raimondii
Gorai.013G213200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 52745187-52746186 Gossypium raimondii
Gorai.013G213200 1.0kb downstream 1.0kb downstream 1981 true Chr13: 52746187-52748167 Gossypium raimondii
Gorai.013G213200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 52747168-52748167 Gossypium raimondii
Gorai.013G213200 2.0kb upstream 2.0kb upstream 2981 true Chr13: 52744187-52747167 Gossypium raimondii
Gorai.013G213200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 52744187-52746186 Gossypium raimondii
Gorai.013G213200 2.0kb downstream 2.0kb downstream 2981 true Chr13: 52746187-52749167 Gossypium raimondii
Gorai.013G213200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 52747168-52749167 Gossypium raimondii
Gorai.013G213200 5.0kb upstream 5.0kb upstream 5981 true Chr13: 52741187-52747167 Gossypium raimondii
Gorai.013G213200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 52741187-52746186 Gossypium raimondii
Gorai.013G213200 5.0kb downstream 5.0kb downstream 5981 true Chr13: 52746187-52752167 Gossypium raimondii
Gorai.013G213200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 52747168-52752167 Gossypium raimondii
Gorai.013G213200 10.0kb upstream 10.0kb upstream 10981 true Chr13: 52736187-52747167 Gossypium raimondii
Gorai.013G213200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 52736187-52746186 Gossypium raimondii
Gorai.013G213200 10.0kb downstream 10.0kb downstream 10981 true Chr13: 52746187-52757167 Gossypium raimondii
Gorai.013G213200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 52747168-52757167 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813698 5264 Brassicales-Malvales Singleton cluster - no MSA
124310220 5266 SBM Singleton cluster - no MSA
124159715 5268 Malvidae Singleton cluster - no MSA
123883892 5270 Rosid Singleton cluster - no MSA
123466599 5271 Pentapetalae Singleton cluster - no MSA
122501903 5272 Eudicot Singleton cluster - no MSA
122050963 5273 Angiosperm View MSA
121348326 5274 Embryophyte View MSA
123426097 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain