Gene : Gorai.005G109000 G. raimondii v2.1
Defline:  (1 of 6) PTHR15184:SF43 - ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  1090
Name:  ? Gorai.005G109000 Secondary Identifier:  ? PAC:26802143
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G109000 0.5kb upstream 0.5kb upstream 873 true Chr05: 19669265-19670137 Gossypium raimondii
Gorai.005G109000 0.5kb upstream 0.5kb upstream 500 false Chr05: 19669265-19669764 Gossypium raimondii
Gorai.005G109000 0.5kb downstream 0.5kb downstream 873 true Chr05: 19669765-19670637 Gossypium raimondii
Gorai.005G109000 0.5kb downstream 0.5kb downstream 500 false Chr05: 19670138-19670637 Gossypium raimondii
Gorai.005G109000 1.0kb upstream 1.0kb upstream 1373 true Chr05: 19668765-19670137 Gossypium raimondii
Gorai.005G109000 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19668765-19669764 Gossypium raimondii
Gorai.005G109000 1.0kb downstream 1.0kb downstream 1373 true Chr05: 19669765-19671137 Gossypium raimondii
Gorai.005G109000 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19670138-19671137 Gossypium raimondii
Gorai.005G109000 2.0kb upstream 2.0kb upstream 2373 true Chr05: 19667765-19670137 Gossypium raimondii
Gorai.005G109000 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19667765-19669764 Gossypium raimondii
Gorai.005G109000 2.0kb downstream 2.0kb downstream 2373 true Chr05: 19669765-19672137 Gossypium raimondii
Gorai.005G109000 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19670138-19672137 Gossypium raimondii
Gorai.005G109000 5.0kb upstream 5.0kb upstream 5373 true Chr05: 19664765-19670137 Gossypium raimondii
Gorai.005G109000 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19664765-19669764 Gossypium raimondii
Gorai.005G109000 5.0kb downstream 5.0kb downstream 5373 true Chr05: 19669765-19675137 Gossypium raimondii
Gorai.005G109000 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19670138-19675137 Gossypium raimondii
Gorai.005G109000 10.0kb upstream 10.0kb upstream 10373 true Chr05: 19659765-19670137 Gossypium raimondii
Gorai.005G109000 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19659765-19669764 Gossypium raimondii
Gorai.005G109000 10.0kb downstream 10.0kb downstream 10373 true Chr05: 19669765-19680137 Gossypium raimondii
Gorai.005G109000 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19670138-19680137 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807022 5264 Brassicales-Malvales Singleton cluster - no MSA
124303904 5266 SBM Singleton cluster - no MSA
124253300 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain