Gene : Gorai.013G228000 G. raimondii v2.1
Defline:  (1 of 3) 3.5.4.5 - Cytidine deaminase / Cytosine nucleoside deaminase Genomic Order:  2280
Name:  ? Gorai.013G228000 Secondary Identifier:  ? PAC:26785921
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6556 Gossypium raimondii pathologic  
Graimondii PWY-7193 Gossypium raimondii pathologic  
Graimondii PWY-7196 Gossypium raimondii pathologic  
Graimondii PWY-7199 Gossypium raimondii pathologic  
Graimondii PWY-7200 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G228000 0.5kb upstream 0.5kb upstream 1897 true Chr13: 54733239-54735135 Gossypium raimondii
Gorai.013G228000 0.5kb upstream 0.5kb upstream 500 false Chr13: 54734636-54735135 Gossypium raimondii
Gorai.013G228000 0.5kb downstream 0.5kb downstream 1897 true Chr13: 54732739-54734635 Gossypium raimondii
Gorai.013G228000 0.5kb downstream 0.5kb downstream 500 false Chr13: 54732739-54733238 Gossypium raimondii
Gorai.013G228000 1.0kb upstream 1.0kb upstream 2397 true Chr13: 54733239-54735635 Gossypium raimondii
Gorai.013G228000 1.0kb upstream 1.0kb upstream 1000 false Chr13: 54734636-54735635 Gossypium raimondii
Gorai.013G228000 1.0kb downstream 1.0kb downstream 2397 true Chr13: 54732239-54734635 Gossypium raimondii
Gorai.013G228000 1.0kb downstream 1.0kb downstream 1000 false Chr13: 54732239-54733238 Gossypium raimondii
Gorai.013G228000 2.0kb upstream 2.0kb upstream 3397 true Chr13: 54733239-54736635 Gossypium raimondii
Gorai.013G228000 2.0kb upstream 2.0kb upstream 2000 false Chr13: 54734636-54736635 Gossypium raimondii
Gorai.013G228000 2.0kb downstream 2.0kb downstream 3397 true Chr13: 54731239-54734635 Gossypium raimondii
Gorai.013G228000 2.0kb downstream 2.0kb downstream 2000 false Chr13: 54731239-54733238 Gossypium raimondii
Gorai.013G228000 5.0kb upstream 5.0kb upstream 6397 true Chr13: 54733239-54739635 Gossypium raimondii
Gorai.013G228000 5.0kb upstream 5.0kb upstream 5000 false Chr13: 54734636-54739635 Gossypium raimondii
Gorai.013G228000 5.0kb downstream 5.0kb downstream 6397 true Chr13: 54728239-54734635 Gossypium raimondii
Gorai.013G228000 5.0kb downstream 5.0kb downstream 5000 false Chr13: 54728239-54733238 Gossypium raimondii
Gorai.013G228000 10.0kb upstream 10.0kb upstream 11397 true Chr13: 54733239-54744635 Gossypium raimondii
Gorai.013G228000 10.0kb upstream 10.0kb upstream 10000 false Chr13: 54734636-54744635 Gossypium raimondii
Gorai.013G228000 10.0kb downstream 10.0kb downstream 11397 true Chr13: 54723239-54734635 Gossypium raimondii
Gorai.013G228000 10.0kb downstream 10.0kb downstream 10000 false Chr13: 54723239-54733238 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813571 5264 Brassicales-Malvales Singleton cluster - no MSA
124310101 5266 SBM Singleton cluster - no MSA
124159611 5268 Malvidae Singleton cluster - no MSA
123883807 5270 Rosid Singleton cluster - no MSA
123744425 5271 Pentapetalae View MSA
122793352 5272 Eudicot View MSA
122048037 5273 Angiosperm View MSA
121343942 5274 Embryophyte View MSA
123424852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain