Gene : Gorai.005G106500 G. raimondii v2.1
Defline:  (1 of 3) PTHR13286:SF6 - HISTONE DEACETYLASE COMPLEX SUBUNIT SAP30L Genomic Order:  1065
Name:  ? Gorai.005G106500 Secondary Identifier:  ? PAC:26805934
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G106500 0.5kb upstream 0.5kb upstream 3886 true Chr05: 19100080-19103965 Gossypium raimondii
Gorai.005G106500 0.5kb upstream 0.5kb upstream 500 false Chr05: 19103466-19103965 Gossypium raimondii
Gorai.005G106500 0.5kb downstream 0.5kb downstream 3886 true Chr05: 19099580-19103465 Gossypium raimondii
Gorai.005G106500 0.5kb downstream 0.5kb downstream 500 false Chr05: 19099580-19100079 Gossypium raimondii
Gorai.005G106500 1.0kb upstream 1.0kb upstream 4386 true Chr05: 19100080-19104465 Gossypium raimondii
Gorai.005G106500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 19103466-19104465 Gossypium raimondii
Gorai.005G106500 1.0kb downstream 1.0kb downstream 4386 true Chr05: 19099080-19103465 Gossypium raimondii
Gorai.005G106500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 19099080-19100079 Gossypium raimondii
Gorai.005G106500 2.0kb upstream 2.0kb upstream 5386 true Chr05: 19100080-19105465 Gossypium raimondii
Gorai.005G106500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 19103466-19105465 Gossypium raimondii
Gorai.005G106500 2.0kb downstream 2.0kb downstream 5386 true Chr05: 19098080-19103465 Gossypium raimondii
Gorai.005G106500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 19098080-19100079 Gossypium raimondii
Gorai.005G106500 5.0kb upstream 5.0kb upstream 8386 true Chr05: 19100080-19108465 Gossypium raimondii
Gorai.005G106500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 19103466-19108465 Gossypium raimondii
Gorai.005G106500 5.0kb downstream 5.0kb downstream 8386 true Chr05: 19095080-19103465 Gossypium raimondii
Gorai.005G106500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 19095080-19100079 Gossypium raimondii
Gorai.005G106500 10.0kb upstream 10.0kb upstream 13386 true Chr05: 19100080-19113465 Gossypium raimondii
Gorai.005G106500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 19103466-19113465 Gossypium raimondii
Gorai.005G106500 10.0kb downstream 10.0kb downstream 13386 true Chr05: 19090080-19103465 Gossypium raimondii
Gorai.005G106500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 19090080-19100079 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807506 5264 Brassicales-Malvales Singleton cluster - no MSA
124304369 5266 SBM Singleton cluster - no MSA
124253540 5268 Malvidae View MSA
124061386 5270 Rosid View MSA
123744780 5271 Pentapetalae View MSA
122793976 5272 Eudicot View MSA
122051007 5273 Angiosperm View MSA
121350494 5274 Embryophyte View MSA
123427737 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain