Gene : Gorai.005G106200 G. raimondii v2.1
Defline:  (1 of 37) PF14223 - gag-polypeptide of LTR copia-type (UBN2) Genomic Order:  1062
Name:  ? Gorai.005G106200 Secondary Identifier:  ? PAC:26805219
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G106200 0.5kb upstream 0.5kb upstream 1013 true Chr05: 18843824-18844836 Gossypium raimondii
Gorai.005G106200 0.5kb upstream 0.5kb upstream 500 false Chr05: 18843824-18844323 Gossypium raimondii
Gorai.005G106200 0.5kb downstream 0.5kb downstream 1013 true Chr05: 18844324-18845336 Gossypium raimondii
Gorai.005G106200 0.5kb downstream 0.5kb downstream 500 false Chr05: 18844837-18845336 Gossypium raimondii
Gorai.005G106200 1.0kb upstream 1.0kb upstream 1513 true Chr05: 18843324-18844836 Gossypium raimondii
Gorai.005G106200 1.0kb upstream 1.0kb upstream 1000 false Chr05: 18843324-18844323 Gossypium raimondii
Gorai.005G106200 1.0kb downstream 1.0kb downstream 1513 true Chr05: 18844324-18845836 Gossypium raimondii
Gorai.005G106200 1.0kb downstream 1.0kb downstream 1000 false Chr05: 18844837-18845836 Gossypium raimondii
Gorai.005G106200 2.0kb upstream 2.0kb upstream 2513 true Chr05: 18842324-18844836 Gossypium raimondii
Gorai.005G106200 2.0kb upstream 2.0kb upstream 2000 false Chr05: 18842324-18844323 Gossypium raimondii
Gorai.005G106200 2.0kb downstream 2.0kb downstream 2513 true Chr05: 18844324-18846836 Gossypium raimondii
Gorai.005G106200 2.0kb downstream 2.0kb downstream 2000 false Chr05: 18844837-18846836 Gossypium raimondii
Gorai.005G106200 5.0kb upstream 5.0kb upstream 5513 true Chr05: 18839324-18844836 Gossypium raimondii
Gorai.005G106200 5.0kb upstream 5.0kb upstream 5000 false Chr05: 18839324-18844323 Gossypium raimondii
Gorai.005G106200 5.0kb downstream 5.0kb downstream 5513 true Chr05: 18844324-18849836 Gossypium raimondii
Gorai.005G106200 5.0kb downstream 5.0kb downstream 5000 false Chr05: 18844837-18849836 Gossypium raimondii
Gorai.005G106200 10.0kb upstream 10.0kb upstream 10513 true Chr05: 18834324-18844836 Gossypium raimondii
Gorai.005G106200 10.0kb upstream 10.0kb upstream 10000 false Chr05: 18834324-18844323 Gossypium raimondii
Gorai.005G106200 10.0kb downstream 10.0kb downstream 10513 true Chr05: 18844324-18854836 Gossypium raimondii
Gorai.005G106200 10.0kb downstream 10.0kb downstream 10000 false Chr05: 18844837-18854836 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121518219 5273 Angiosperm View MSA
123814698 5264 Brassicales-Malvales View MSA
124311175 5266 SBM View MSA
124160513 5268 Malvidae View MSA
123884585 5270 Rosid View MSA
123467192 5271 Pentapetalae View MSA
122502493 5272 Eudicot View MSA
120791035 5274 Embryophyte View MSA
122832662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain