Gene : Gorai.013G184400 G. raimondii v2.1
Defline:  (1 of 2) PTHR10108:SF708 - TOCOPHEROL O-METHYLTRANSFERASE, CHLOROPLASTIC Genomic Order:  1844
Name:  ? Gorai.013G184400 Secondary Identifier:  ? PAC:26790937
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1422 Gossypium raimondii pathologic  
Graimondii PWY-7436 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G184400 0.5kb upstream 0.5kb upstream 7537 true Chr13: 48328494-48336030 Gossypium raimondii
Gorai.013G184400 0.5kb upstream 0.5kb upstream 500 false Chr13: 48328494-48328993 Gossypium raimondii
Gorai.013G184400 0.5kb downstream 0.5kb downstream 7537 true Chr13: 48328994-48336530 Gossypium raimondii
Gorai.013G184400 0.5kb downstream 0.5kb downstream 500 false Chr13: 48336031-48336530 Gossypium raimondii
Gorai.013G184400 1.0kb upstream 1.0kb upstream 8037 true Chr13: 48327994-48336030 Gossypium raimondii
Gorai.013G184400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 48327994-48328993 Gossypium raimondii
Gorai.013G184400 1.0kb downstream 1.0kb downstream 8037 true Chr13: 48328994-48337030 Gossypium raimondii
Gorai.013G184400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 48336031-48337030 Gossypium raimondii
Gorai.013G184400 2.0kb upstream 2.0kb upstream 9037 true Chr13: 48326994-48336030 Gossypium raimondii
Gorai.013G184400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 48326994-48328993 Gossypium raimondii
Gorai.013G184400 2.0kb downstream 2.0kb downstream 9037 true Chr13: 48328994-48338030 Gossypium raimondii
Gorai.013G184400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 48336031-48338030 Gossypium raimondii
Gorai.013G184400 5.0kb upstream 5.0kb upstream 12037 true Chr13: 48323994-48336030 Gossypium raimondii
Gorai.013G184400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 48323994-48328993 Gossypium raimondii
Gorai.013G184400 5.0kb downstream 5.0kb downstream 12037 true Chr13: 48328994-48341030 Gossypium raimondii
Gorai.013G184400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 48336031-48341030 Gossypium raimondii
Gorai.013G184400 10.0kb upstream 10.0kb upstream 17037 true Chr13: 48318994-48336030 Gossypium raimondii
Gorai.013G184400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 48318994-48328993 Gossypium raimondii
Gorai.013G184400 10.0kb downstream 10.0kb downstream 17037 true Chr13: 48328994-48346030 Gossypium raimondii
Gorai.013G184400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 48336031-48346030 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839002 5264 Brassicales-Malvales View MSA
124342588 5266 SBM View MSA
124238021 5268 Malvidae View MSA
124067151 5270 Rosid View MSA
123747323 5271 Pentapetalae View MSA
122786433 5272 Eudicot View MSA
122044817 5273 Angiosperm View MSA
121347406 5274 Embryophyte View MSA
123427925 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain