Gene : Gorai.005G113900 G. raimondii v2.1
Defline:  (1 of 3) KOG3172 - Small nuclear ribonucleoprotein Sm D3 Genomic Order:  1139
Name:  ? Gorai.005G113900 Secondary Identifier:  ? PAC:26806132
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G113900 0.5kb upstream 0.5kb upstream 2361 true Chr05: 21789199-21791559 Gossypium raimondii
Gorai.005G113900 0.5kb upstream 0.5kb upstream 500 false Chr05: 21789199-21789698 Gossypium raimondii
Gorai.005G113900 0.5kb downstream 0.5kb downstream 2361 true Chr05: 21789699-21792059 Gossypium raimondii
Gorai.005G113900 0.5kb downstream 0.5kb downstream 500 false Chr05: 21791560-21792059 Gossypium raimondii
Gorai.005G113900 1.0kb upstream 1.0kb upstream 2861 true Chr05: 21788699-21791559 Gossypium raimondii
Gorai.005G113900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 21788699-21789698 Gossypium raimondii
Gorai.005G113900 1.0kb downstream 1.0kb downstream 2861 true Chr05: 21789699-21792559 Gossypium raimondii
Gorai.005G113900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 21791560-21792559 Gossypium raimondii
Gorai.005G113900 2.0kb upstream 2.0kb upstream 3861 true Chr05: 21787699-21791559 Gossypium raimondii
Gorai.005G113900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 21787699-21789698 Gossypium raimondii
Gorai.005G113900 2.0kb downstream 2.0kb downstream 3861 true Chr05: 21789699-21793559 Gossypium raimondii
Gorai.005G113900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 21791560-21793559 Gossypium raimondii
Gorai.005G113900 5.0kb upstream 5.0kb upstream 6861 true Chr05: 21784699-21791559 Gossypium raimondii
Gorai.005G113900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 21784699-21789698 Gossypium raimondii
Gorai.005G113900 5.0kb downstream 5.0kb downstream 6861 true Chr05: 21789699-21796559 Gossypium raimondii
Gorai.005G113900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 21791560-21796559 Gossypium raimondii
Gorai.005G113900 10.0kb upstream 10.0kb upstream 11861 true Chr05: 21779699-21791559 Gossypium raimondii
Gorai.005G113900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 21779699-21789698 Gossypium raimondii
Gorai.005G113900 10.0kb downstream 10.0kb downstream 11861 true Chr05: 21789699-21801559 Gossypium raimondii
Gorai.005G113900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 21791560-21801559 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838882 5264 Brassicales-Malvales View MSA
124338076 5266 SBM View MSA
124243625 5268 Malvidae View MSA
124071262 5270 Rosid View MSA
123746571 5271 Pentapetalae View MSA
122793733 5272 Eudicot View MSA
122047121 5273 Angiosperm View MSA
121348903 5274 Embryophyte View MSA
123424585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain