Gene : Gorai.005G110900 G. raimondii v2.1
Defline:  (1 of 2) PTHR10742:SF284 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1A Genomic Order:  1109
Name:  ? Gorai.005G110900 Secondary Identifier:  ? PAC:26803706
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6441 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G110900 0.5kb upstream 0.5kb upstream 9860 true Chr05: 20317478-20327337 Gossypium raimondii
Gorai.005G110900 0.5kb upstream 0.5kb upstream 500 false Chr05: 20326838-20327337 Gossypium raimondii
Gorai.005G110900 0.5kb downstream 0.5kb downstream 9860 true Chr05: 20316978-20326837 Gossypium raimondii
Gorai.005G110900 0.5kb downstream 0.5kb downstream 500 false Chr05: 20316978-20317477 Gossypium raimondii
Gorai.005G110900 1.0kb upstream 1.0kb upstream 10360 true Chr05: 20317478-20327837 Gossypium raimondii
Gorai.005G110900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 20326838-20327837 Gossypium raimondii
Gorai.005G110900 1.0kb downstream 1.0kb downstream 10360 true Chr05: 20316478-20326837 Gossypium raimondii
Gorai.005G110900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 20316478-20317477 Gossypium raimondii
Gorai.005G110900 2.0kb upstream 2.0kb upstream 11360 true Chr05: 20317478-20328837 Gossypium raimondii
Gorai.005G110900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 20326838-20328837 Gossypium raimondii
Gorai.005G110900 2.0kb downstream 2.0kb downstream 11360 true Chr05: 20315478-20326837 Gossypium raimondii
Gorai.005G110900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 20315478-20317477 Gossypium raimondii
Gorai.005G110900 5.0kb upstream 5.0kb upstream 14360 true Chr05: 20317478-20331837 Gossypium raimondii
Gorai.005G110900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 20326838-20331837 Gossypium raimondii
Gorai.005G110900 5.0kb downstream 5.0kb downstream 14360 true Chr05: 20312478-20326837 Gossypium raimondii
Gorai.005G110900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 20312478-20317477 Gossypium raimondii
Gorai.005G110900 10.0kb upstream 10.0kb upstream 19360 true Chr05: 20317478-20336837 Gossypium raimondii
Gorai.005G110900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 20326838-20336837 Gossypium raimondii
Gorai.005G110900 10.0kb downstream 10.0kb downstream 19360 true Chr05: 20307478-20326837 Gossypium raimondii
Gorai.005G110900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 20307478-20317477 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827782 5264 Brassicales-Malvales View MSA
124338849 5266 SBM View MSA
124238946 5268 Malvidae View MSA
124062670 5270 Rosid View MSA
123738203 5271 Pentapetalae View MSA
122790962 5272 Eudicot View MSA
122046463 5273 Angiosperm View MSA
121349079 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain