Gene : Gorai.N017600 G. raimondii v2.1
Defline:  (1 of 8) 2.1.1.220 - tRNA (adenine(58)-N(1))-methyltransferase / tRNA m(1)A(58) methyltransferase Genomic Order:  1
Name:  ? Gorai.N017600 Secondary Identifier:  ? PAC:26834958
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6829 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.N017600 0.5kb upstream 0.5kb upstream 6382 true scaffold_169: 430-6811 Gossypium raimondii
Gorai.N017600 0.5kb upstream 0.5kb upstream 500 false scaffold_169: 6312-6811 Gossypium raimondii
Gorai.N017600 0.5kb downstream 0.5kb downstream 6311 true scaffold_169: 1-6311 Gossypium raimondii
Gorai.N017600 0.5kb downstream 0.5kb downstream 429 false scaffold_169: 1-429 Gossypium raimondii
Gorai.N017600 1.0kb upstream 1.0kb upstream 6882 true scaffold_169: 430-7311 Gossypium raimondii
Gorai.N017600 1.0kb upstream 1.0kb upstream 1000 false scaffold_169: 6312-7311 Gossypium raimondii
Gorai.N017600 1.0kb downstream 1.0kb downstream 6311 true scaffold_169: 1-6311 Gossypium raimondii
Gorai.N017600 1.0kb downstream 1.0kb downstream 429 false scaffold_169: 1-429 Gossypium raimondii
Gorai.N017600 2.0kb upstream 2.0kb upstream 7882 true scaffold_169: 430-8311 Gossypium raimondii
Gorai.N017600 2.0kb upstream 2.0kb upstream 2000 false scaffold_169: 6312-8311 Gossypium raimondii
Gorai.N017600 2.0kb downstream 2.0kb downstream 6311 true scaffold_169: 1-6311 Gossypium raimondii
Gorai.N017600 2.0kb downstream 2.0kb downstream 429 false scaffold_169: 1-429 Gossypium raimondii
Gorai.N017600 5.0kb upstream 5.0kb upstream 10882 true scaffold_169: 430-11311 Gossypium raimondii
Gorai.N017600 5.0kb upstream 5.0kb upstream 5000 false scaffold_169: 6312-11311 Gossypium raimondii
Gorai.N017600 5.0kb downstream 5.0kb downstream 6311 true scaffold_169: 1-6311 Gossypium raimondii
Gorai.N017600 5.0kb downstream 5.0kb downstream 429 false scaffold_169: 1-429 Gossypium raimondii
Gorai.N017600 10.0kb upstream 10.0kb upstream 12139 true scaffold_169: 430-12568 Gossypium raimondii
Gorai.N017600 10.0kb upstream 10.0kb upstream 6257 false scaffold_169: 6312-12568 Gossypium raimondii
Gorai.N017600 10.0kb downstream 10.0kb downstream 6311 true scaffold_169: 1-6311 Gossypium raimondii
Gorai.N017600 10.0kb downstream 10.0kb downstream 429 false scaffold_169: 1-429 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121518421 5273 Angiosperm View MSA
123815118 5264 Brassicales-Malvales View MSA
124311559 5266 SBM View MSA
124160815 5268 Malvidae View MSA
123884836 5270 Rosid View MSA
123467413 5271 Pentapetalae View MSA
122502713 5272 Eudicot View MSA
120791234 5274 Embryophyte View MSA
122832855 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain