Gene : Gorai.013G044200 G. raimondii v2.1
Defline:  (1 of 1) PTHR32439:SF0 - FERREDOXIN--NITRITE REDUCTASE, CHLOROPLASTIC Genomic Order:  442
Name:  ? Gorai.013G044200 Secondary Identifier:  ? PAC:26787604
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-381 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G044200 0.5kb upstream 0.5kb upstream 3087 true Chr13: 3860850-3863936 Gossypium raimondii
Gorai.013G044200 0.5kb upstream 0.5kb upstream 500 false Chr13: 3863437-3863936 Gossypium raimondii
Gorai.013G044200 0.5kb downstream 0.5kb downstream 3087 true Chr13: 3860350-3863436 Gossypium raimondii
Gorai.013G044200 0.5kb downstream 0.5kb downstream 500 false Chr13: 3860350-3860849 Gossypium raimondii
Gorai.013G044200 1.0kb upstream 1.0kb upstream 3587 true Chr13: 3860850-3864436 Gossypium raimondii
Gorai.013G044200 1.0kb upstream 1.0kb upstream 1000 false Chr13: 3863437-3864436 Gossypium raimondii
Gorai.013G044200 1.0kb downstream 1.0kb downstream 3587 true Chr13: 3859850-3863436 Gossypium raimondii
Gorai.013G044200 1.0kb downstream 1.0kb downstream 1000 false Chr13: 3859850-3860849 Gossypium raimondii
Gorai.013G044200 2.0kb upstream 2.0kb upstream 4587 true Chr13: 3860850-3865436 Gossypium raimondii
Gorai.013G044200 2.0kb upstream 2.0kb upstream 2000 false Chr13: 3863437-3865436 Gossypium raimondii
Gorai.013G044200 2.0kb downstream 2.0kb downstream 4587 true Chr13: 3858850-3863436 Gossypium raimondii
Gorai.013G044200 2.0kb downstream 2.0kb downstream 2000 false Chr13: 3858850-3860849 Gossypium raimondii
Gorai.013G044200 5.0kb upstream 5.0kb upstream 7587 true Chr13: 3860850-3868436 Gossypium raimondii
Gorai.013G044200 5.0kb upstream 5.0kb upstream 5000 false Chr13: 3863437-3868436 Gossypium raimondii
Gorai.013G044200 5.0kb downstream 5.0kb downstream 7587 true Chr13: 3855850-3863436 Gossypium raimondii
Gorai.013G044200 5.0kb downstream 5.0kb downstream 5000 false Chr13: 3855850-3860849 Gossypium raimondii
Gorai.013G044200 10.0kb upstream 10.0kb upstream 12587 true Chr13: 3860850-3873436 Gossypium raimondii
Gorai.013G044200 10.0kb upstream 10.0kb upstream 10000 false Chr13: 3863437-3873436 Gossypium raimondii
Gorai.013G044200 10.0kb downstream 10.0kb downstream 12587 true Chr13: 3850850-3863436 Gossypium raimondii
Gorai.013G044200 10.0kb downstream 10.0kb downstream 10000 false Chr13: 3850850-3860849 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829693 5264 Brassicales-Malvales View MSA
124343560 5266 SBM View MSA
124251612 5268 Malvidae View MSA
124060764 5270 Rosid View MSA
123739378 5271 Pentapetalae View MSA
122787836 5272 Eudicot View MSA
122043925 5273 Angiosperm View MSA
123428980 5275 Viridiplantae View MSA
121346726 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain