Gene : Gorai.013G048500 G. raimondii v2.1
Defline:  (1 of 6) PTHR15184:SF43 - ATP SYNTHASE SUBUNIT BETA, CHLOROPLASTIC Genomic Order:  485
Name:  ? Gorai.013G048500 Secondary Identifier:  ? PAC:26786147
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-6126 Gossypium raimondii pathologic  
Graimondii PWY-7219 Gossypium raimondii pathologic  
Graimondii PWY-7229 Gossypium raimondii pathologic  
Graimondii PWY-841 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G048500 0.5kb upstream 0.5kb upstream 2039 true Chr13: 4327285-4329323 Gossypium raimondii
Gorai.013G048500 0.5kb upstream 0.5kb upstream 500 false Chr13: 4328824-4329323 Gossypium raimondii
Gorai.013G048500 0.5kb downstream 0.5kb downstream 2039 true Chr13: 4326785-4328823 Gossypium raimondii
Gorai.013G048500 0.5kb downstream 0.5kb downstream 500 false Chr13: 4326785-4327284 Gossypium raimondii
Gorai.013G048500 1.0kb upstream 1.0kb upstream 2539 true Chr13: 4327285-4329823 Gossypium raimondii
Gorai.013G048500 1.0kb upstream 1.0kb upstream 1000 false Chr13: 4328824-4329823 Gossypium raimondii
Gorai.013G048500 1.0kb downstream 1.0kb downstream 2539 true Chr13: 4326285-4328823 Gossypium raimondii
Gorai.013G048500 1.0kb downstream 1.0kb downstream 1000 false Chr13: 4326285-4327284 Gossypium raimondii
Gorai.013G048500 2.0kb upstream 2.0kb upstream 3539 true Chr13: 4327285-4330823 Gossypium raimondii
Gorai.013G048500 2.0kb upstream 2.0kb upstream 2000 false Chr13: 4328824-4330823 Gossypium raimondii
Gorai.013G048500 2.0kb downstream 2.0kb downstream 3539 true Chr13: 4325285-4328823 Gossypium raimondii
Gorai.013G048500 2.0kb downstream 2.0kb downstream 2000 false Chr13: 4325285-4327284 Gossypium raimondii
Gorai.013G048500 5.0kb upstream 5.0kb upstream 6539 true Chr13: 4327285-4333823 Gossypium raimondii
Gorai.013G048500 5.0kb upstream 5.0kb upstream 5000 false Chr13: 4328824-4333823 Gossypium raimondii
Gorai.013G048500 5.0kb downstream 5.0kb downstream 6539 true Chr13: 4322285-4328823 Gossypium raimondii
Gorai.013G048500 5.0kb downstream 5.0kb downstream 5000 false Chr13: 4322285-4327284 Gossypium raimondii
Gorai.013G048500 10.0kb upstream 10.0kb upstream 11539 true Chr13: 4327285-4338823 Gossypium raimondii
Gorai.013G048500 10.0kb upstream 10.0kb upstream 10000 false Chr13: 4328824-4338823 Gossypium raimondii
Gorai.013G048500 10.0kb downstream 10.0kb downstream 11539 true Chr13: 4317285-4328823 Gossypium raimondii
Gorai.013G048500 10.0kb downstream 10.0kb downstream 10000 false Chr13: 4317285-4327284 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123838703 5264 Brassicales-Malvales View MSA
124322489 5266 SBM View MSA
124250549 5268 Malvidae View MSA
124072402 5270 Rosid View MSA
123749962 5271 Pentapetalae View MSA
122797810 5272 Eudicot View MSA
122051511 5273 Angiosperm View MSA
121351676 5274 Embryophyte View MSA
123424920 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain