Gene : Gorai.005G114900 G. raimondii v2.1

Defline:  (1 of 3) PTHR21049:SF1 - DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT 1A Genomic Order:  1149
Name:  ? Gorai.005G114900 Secondary Identifier:  ? PAC:26804672

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G114900 0.5kb upstream 0.5kb upstream 4453 true Chr05: 22365743-22370195 Gossypium raimondii
Gorai.005G114900 0.5kb upstream 0.5kb upstream 500 false Chr05: 22369696-22370195 Gossypium raimondii
Gorai.005G114900 0.5kb downstream 0.5kb downstream 4453 true Chr05: 22365243-22369695 Gossypium raimondii
Gorai.005G114900 0.5kb downstream 0.5kb downstream 500 false Chr05: 22365243-22365742 Gossypium raimondii
Gorai.005G114900 1.0kb upstream 1.0kb upstream 4953 true Chr05: 22365743-22370695 Gossypium raimondii
Gorai.005G114900 1.0kb upstream 1.0kb upstream 1000 false Chr05: 22369696-22370695 Gossypium raimondii
Gorai.005G114900 1.0kb downstream 1.0kb downstream 4953 true Chr05: 22364743-22369695 Gossypium raimondii
Gorai.005G114900 1.0kb downstream 1.0kb downstream 1000 false Chr05: 22364743-22365742 Gossypium raimondii
Gorai.005G114900 2.0kb upstream 2.0kb upstream 5953 true Chr05: 22365743-22371695 Gossypium raimondii
Gorai.005G114900 2.0kb upstream 2.0kb upstream 2000 false Chr05: 22369696-22371695 Gossypium raimondii
Gorai.005G114900 2.0kb downstream 2.0kb downstream 5953 true Chr05: 22363743-22369695 Gossypium raimondii
Gorai.005G114900 2.0kb downstream 2.0kb downstream 2000 false Chr05: 22363743-22365742 Gossypium raimondii
Gorai.005G114900 5.0kb upstream 5.0kb upstream 8953 true Chr05: 22365743-22374695 Gossypium raimondii
Gorai.005G114900 5.0kb upstream 5.0kb upstream 5000 false Chr05: 22369696-22374695 Gossypium raimondii
Gorai.005G114900 5.0kb downstream 5.0kb downstream 8953 true Chr05: 22360743-22369695 Gossypium raimondii
Gorai.005G114900 5.0kb downstream 5.0kb downstream 5000 false Chr05: 22360743-22365742 Gossypium raimondii
Gorai.005G114900 10.0kb upstream 10.0kb upstream 13953 true Chr05: 22365743-22379695 Gossypium raimondii
Gorai.005G114900 10.0kb upstream 10.0kb upstream 10000 false Chr05: 22369696-22379695 Gossypium raimondii
Gorai.005G114900 10.0kb downstream 10.0kb downstream 13953 true Chr05: 22355743-22369695 Gossypium raimondii
Gorai.005G114900 10.0kb downstream 10.0kb downstream 10000 false Chr05: 22355743-22365742 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123827563 5264 Brassicales-Malvales View MSA
124338985 5266 SBM View MSA
124237474 5268 Malvidae View MSA
124068967 5270 Rosid View MSA
123737223 5271 Pentapetalae View MSA
122791942 5272 Eudicot View MSA
122045839 5273 Angiosperm View MSA
121344517 5274 Embryophyte View MSA
123425585 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain