Gene : Gorai.013G021400 G. raimondii v2.1
Defline:  (1 of 6) PTHR11709:SF66 - LACCASE-17 Genomic Order:  214
Name:  ? Gorai.013G021400 Secondary Identifier:  ? PAC:26790764
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5466 Gossypium raimondii pathologic  
Graimondii PWY-6824 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G021400 0.5kb upstream 0.5kb upstream 3068 true Chr13: 1507768-1510835 Gossypium raimondii
Gorai.013G021400 0.5kb upstream 0.5kb upstream 500 false Chr13: 1510336-1510835 Gossypium raimondii
Gorai.013G021400 0.5kb downstream 0.5kb downstream 3068 true Chr13: 1507268-1510335 Gossypium raimondii
Gorai.013G021400 0.5kb downstream 0.5kb downstream 500 false Chr13: 1507268-1507767 Gossypium raimondii
Gorai.013G021400 1.0kb upstream 1.0kb upstream 3568 true Chr13: 1507768-1511335 Gossypium raimondii
Gorai.013G021400 1.0kb upstream 1.0kb upstream 1000 false Chr13: 1510336-1511335 Gossypium raimondii
Gorai.013G021400 1.0kb downstream 1.0kb downstream 3568 true Chr13: 1506768-1510335 Gossypium raimondii
Gorai.013G021400 1.0kb downstream 1.0kb downstream 1000 false Chr13: 1506768-1507767 Gossypium raimondii
Gorai.013G021400 2.0kb upstream 2.0kb upstream 4568 true Chr13: 1507768-1512335 Gossypium raimondii
Gorai.013G021400 2.0kb upstream 2.0kb upstream 2000 false Chr13: 1510336-1512335 Gossypium raimondii
Gorai.013G021400 2.0kb downstream 2.0kb downstream 4568 true Chr13: 1505768-1510335 Gossypium raimondii
Gorai.013G021400 2.0kb downstream 2.0kb downstream 2000 false Chr13: 1505768-1507767 Gossypium raimondii
Gorai.013G021400 5.0kb upstream 5.0kb upstream 7568 true Chr13: 1507768-1515335 Gossypium raimondii
Gorai.013G021400 5.0kb upstream 5.0kb upstream 5000 false Chr13: 1510336-1515335 Gossypium raimondii
Gorai.013G021400 5.0kb downstream 5.0kb downstream 7568 true Chr13: 1502768-1510335 Gossypium raimondii
Gorai.013G021400 5.0kb downstream 5.0kb downstream 5000 false Chr13: 1502768-1507767 Gossypium raimondii
Gorai.013G021400 10.0kb upstream 10.0kb upstream 12568 true Chr13: 1507768-1520335 Gossypium raimondii
Gorai.013G021400 10.0kb upstream 10.0kb upstream 10000 false Chr13: 1510336-1520335 Gossypium raimondii
Gorai.013G021400 10.0kb downstream 10.0kb downstream 12568 true Chr13: 1497768-1510335 Gossypium raimondii
Gorai.013G021400 10.0kb downstream 10.0kb downstream 10000 false Chr13: 1497768-1507767 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123836632 5264 Brassicales-Malvales View MSA
124344655 5266 SBM View MSA
124251749 5268 Malvidae View MSA
124062715 5270 Rosid View MSA
123751220 5271 Pentapetalae View MSA
122795105 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain