Gene : Gorai.013G027700 G. raimondii v2.1
Defline:  (1 of 7) PTHR11709:SF116 - LACCASE-11 Genomic Order:  277
Name:  ? Gorai.013G027700 Secondary Identifier:  ? PAC:26788728
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5466 Gossypium raimondii pathologic  
Graimondii PWY-6824 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.013G027700 0.5kb upstream 0.5kb upstream 1320 true Chr13: 2052067-2053386 Gossypium raimondii
Gorai.013G027700 0.5kb upstream 0.5kb upstream 500 false Chr13: 2052887-2053386 Gossypium raimondii
Gorai.013G027700 0.5kb downstream 0.5kb downstream 1320 true Chr13: 2051567-2052886 Gossypium raimondii
Gorai.013G027700 0.5kb downstream 0.5kb downstream 500 false Chr13: 2051567-2052066 Gossypium raimondii
Gorai.013G027700 1.0kb upstream 1.0kb upstream 1820 true Chr13: 2052067-2053886 Gossypium raimondii
Gorai.013G027700 1.0kb upstream 1.0kb upstream 1000 false Chr13: 2052887-2053886 Gossypium raimondii
Gorai.013G027700 1.0kb downstream 1.0kb downstream 1820 true Chr13: 2051067-2052886 Gossypium raimondii
Gorai.013G027700 1.0kb downstream 1.0kb downstream 1000 false Chr13: 2051067-2052066 Gossypium raimondii
Gorai.013G027700 2.0kb upstream 2.0kb upstream 2820 true Chr13: 2052067-2054886 Gossypium raimondii
Gorai.013G027700 2.0kb upstream 2.0kb upstream 2000 false Chr13: 2052887-2054886 Gossypium raimondii
Gorai.013G027700 2.0kb downstream 2.0kb downstream 2820 true Chr13: 2050067-2052886 Gossypium raimondii
Gorai.013G027700 2.0kb downstream 2.0kb downstream 2000 false Chr13: 2050067-2052066 Gossypium raimondii
Gorai.013G027700 5.0kb upstream 5.0kb upstream 5820 true Chr13: 2052067-2057886 Gossypium raimondii
Gorai.013G027700 5.0kb upstream 5.0kb upstream 5000 false Chr13: 2052887-2057886 Gossypium raimondii
Gorai.013G027700 5.0kb downstream 5.0kb downstream 5820 true Chr13: 2047067-2052886 Gossypium raimondii
Gorai.013G027700 5.0kb downstream 5.0kb downstream 5000 false Chr13: 2047067-2052066 Gossypium raimondii
Gorai.013G027700 10.0kb upstream 10.0kb upstream 10820 true Chr13: 2052067-2062886 Gossypium raimondii
Gorai.013G027700 10.0kb upstream 10.0kb upstream 10000 false Chr13: 2052887-2062886 Gossypium raimondii
Gorai.013G027700 10.0kb downstream 10.0kb downstream 10820 true Chr13: 2042067-2052886 Gossypium raimondii
Gorai.013G027700 10.0kb downstream 10.0kb downstream 10000 false Chr13: 2042067-2052066 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123813973 5264 Brassicales-Malvales Singleton cluster - no MSA
124310484 5266 SBM Singleton cluster - no MSA
124253536 5268 Malvidae View MSA
124074163 5270 Rosid View MSA
123753088 5271 Pentapetalae View MSA
122795935 5272 Eudicot View MSA
122050716 5273 Angiosperm View MSA
121350155 5274 Embryophyte View MSA
123428014 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain