Gene : Gorai.005G117500 G. raimondii v2.1
Defline:  (1 of 2) PTHR22835//PTHR22835:SF168 - ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN Genomic Order:  1175
Name:  ? Gorai.005G117500 Secondary Identifier:  ? PAC:26802273
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii LIPAS-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G117500 0.5kb upstream 0.5kb upstream 3741 true Chr05: 23544271-23548011 Gossypium raimondii
Gorai.005G117500 0.5kb upstream 0.5kb upstream 500 false Chr05: 23547512-23548011 Gossypium raimondii
Gorai.005G117500 0.5kb downstream 0.5kb downstream 3741 true Chr05: 23543771-23547511 Gossypium raimondii
Gorai.005G117500 0.5kb downstream 0.5kb downstream 500 false Chr05: 23543771-23544270 Gossypium raimondii
Gorai.005G117500 1.0kb upstream 1.0kb upstream 4241 true Chr05: 23544271-23548511 Gossypium raimondii
Gorai.005G117500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 23547512-23548511 Gossypium raimondii
Gorai.005G117500 1.0kb downstream 1.0kb downstream 4241 true Chr05: 23543271-23547511 Gossypium raimondii
Gorai.005G117500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 23543271-23544270 Gossypium raimondii
Gorai.005G117500 2.0kb upstream 2.0kb upstream 5241 true Chr05: 23544271-23549511 Gossypium raimondii
Gorai.005G117500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 23547512-23549511 Gossypium raimondii
Gorai.005G117500 2.0kb downstream 2.0kb downstream 5241 true Chr05: 23542271-23547511 Gossypium raimondii
Gorai.005G117500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 23542271-23544270 Gossypium raimondii
Gorai.005G117500 5.0kb upstream 5.0kb upstream 8241 true Chr05: 23544271-23552511 Gossypium raimondii
Gorai.005G117500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 23547512-23552511 Gossypium raimondii
Gorai.005G117500 5.0kb downstream 5.0kb downstream 8241 true Chr05: 23539271-23547511 Gossypium raimondii
Gorai.005G117500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 23539271-23544270 Gossypium raimondii
Gorai.005G117500 10.0kb upstream 10.0kb upstream 13241 true Chr05: 23544271-23557511 Gossypium raimondii
Gorai.005G117500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 23547512-23557511 Gossypium raimondii
Gorai.005G117500 10.0kb downstream 10.0kb downstream 13241 true Chr05: 23534271-23547511 Gossypium raimondii
Gorai.005G117500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 23534271-23544270 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834355 5264 Brassicales-Malvales View MSA
124343161 5266 SBM View MSA
124243693 5268 Malvidae View MSA
124069396 5270 Rosid View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain