Gene : Gorai.005G127500 G. raimondii v2.1
Defline:  (1 of 2) 2.3.3.13 - 2-isopropylmalate synthase / Isopropylmalate synthetase Genomic Order:  1275
Name:  ? Gorai.005G127500 Secondary Identifier:  ? PAC:26804575
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii BRANCHED-CHAIN-AA-SYN-PWY Gossypium raimondii pathologic  
Graimondii LEUSYN-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G127500 0.5kb upstream 0.5kb upstream 16203 true Chr05: 29196042-29212244 Gossypium raimondii
Gorai.005G127500 0.5kb upstream 0.5kb upstream 500 false Chr05: 29196042-29196541 Gossypium raimondii
Gorai.005G127500 0.5kb downstream 0.5kb downstream 16203 true Chr05: 29196542-29212744 Gossypium raimondii
Gorai.005G127500 0.5kb downstream 0.5kb downstream 500 false Chr05: 29212245-29212744 Gossypium raimondii
Gorai.005G127500 1.0kb upstream 1.0kb upstream 16703 true Chr05: 29195542-29212244 Gossypium raimondii
Gorai.005G127500 1.0kb upstream 1.0kb upstream 1000 false Chr05: 29195542-29196541 Gossypium raimondii
Gorai.005G127500 1.0kb downstream 1.0kb downstream 16703 true Chr05: 29196542-29213244 Gossypium raimondii
Gorai.005G127500 1.0kb downstream 1.0kb downstream 1000 false Chr05: 29212245-29213244 Gossypium raimondii
Gorai.005G127500 2.0kb upstream 2.0kb upstream 17703 true Chr05: 29194542-29212244 Gossypium raimondii
Gorai.005G127500 2.0kb upstream 2.0kb upstream 2000 false Chr05: 29194542-29196541 Gossypium raimondii
Gorai.005G127500 2.0kb downstream 2.0kb downstream 17703 true Chr05: 29196542-29214244 Gossypium raimondii
Gorai.005G127500 2.0kb downstream 2.0kb downstream 2000 false Chr05: 29212245-29214244 Gossypium raimondii
Gorai.005G127500 5.0kb upstream 5.0kb upstream 20703 true Chr05: 29191542-29212244 Gossypium raimondii
Gorai.005G127500 5.0kb upstream 5.0kb upstream 5000 false Chr05: 29191542-29196541 Gossypium raimondii
Gorai.005G127500 5.0kb downstream 5.0kb downstream 20703 true Chr05: 29196542-29217244 Gossypium raimondii
Gorai.005G127500 5.0kb downstream 5.0kb downstream 5000 false Chr05: 29212245-29217244 Gossypium raimondii
Gorai.005G127500 10.0kb upstream 10.0kb upstream 25703 true Chr05: 29186542-29212244 Gossypium raimondii
Gorai.005G127500 10.0kb upstream 10.0kb upstream 10000 false Chr05: 29186542-29196541 Gossypium raimondii
Gorai.005G127500 10.0kb downstream 10.0kb downstream 25703 true Chr05: 29196542-29222244 Gossypium raimondii
Gorai.005G127500 10.0kb downstream 10.0kb downstream 10000 false Chr05: 29212245-29222244 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123837144 5264 Brassicales-Malvales View MSA
124322248 5266 SBM View MSA
124251393 5268 Malvidae View MSA
124073887 5270 Rosid View MSA
123749835 5271 Pentapetalae View MSA
122795041 5272 Eudicot View MSA
122042075 5273 Angiosperm View MSA
121343846 5274 Embryophyte View MSA
123424493 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain