Gene : Gorai.005G141600 G. raimondii v2.1
Defline:  (1 of 5) PTHR23012//PTHR23012:SF57 - MEMBRANE ASSOCIATED RING FINGER Genomic Order:  1416
Name:  ? Gorai.005G141600 Secondary Identifier:  ? PAC:26802145
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G141600 0.5kb upstream 0.5kb upstream 4157 true Chr05: 38481225-38485381 Gossypium raimondii
Gorai.005G141600 0.5kb upstream 0.5kb upstream 500 false Chr05: 38484882-38485381 Gossypium raimondii
Gorai.005G141600 0.5kb downstream 0.5kb downstream 4157 true Chr05: 38480725-38484881 Gossypium raimondii
Gorai.005G141600 0.5kb downstream 0.5kb downstream 500 false Chr05: 38480725-38481224 Gossypium raimondii
Gorai.005G141600 1.0kb upstream 1.0kb upstream 4657 true Chr05: 38481225-38485881 Gossypium raimondii
Gorai.005G141600 1.0kb upstream 1.0kb upstream 1000 false Chr05: 38484882-38485881 Gossypium raimondii
Gorai.005G141600 1.0kb downstream 1.0kb downstream 4657 true Chr05: 38480225-38484881 Gossypium raimondii
Gorai.005G141600 1.0kb downstream 1.0kb downstream 1000 false Chr05: 38480225-38481224 Gossypium raimondii
Gorai.005G141600 2.0kb upstream 2.0kb upstream 5657 true Chr05: 38481225-38486881 Gossypium raimondii
Gorai.005G141600 2.0kb upstream 2.0kb upstream 2000 false Chr05: 38484882-38486881 Gossypium raimondii
Gorai.005G141600 2.0kb downstream 2.0kb downstream 5657 true Chr05: 38479225-38484881 Gossypium raimondii
Gorai.005G141600 2.0kb downstream 2.0kb downstream 2000 false Chr05: 38479225-38481224 Gossypium raimondii
Gorai.005G141600 5.0kb upstream 5.0kb upstream 8657 true Chr05: 38481225-38489881 Gossypium raimondii
Gorai.005G141600 5.0kb upstream 5.0kb upstream 5000 false Chr05: 38484882-38489881 Gossypium raimondii
Gorai.005G141600 5.0kb downstream 5.0kb downstream 8657 true Chr05: 38476225-38484881 Gossypium raimondii
Gorai.005G141600 5.0kb downstream 5.0kb downstream 5000 false Chr05: 38476225-38481224 Gossypium raimondii
Gorai.005G141600 10.0kb upstream 10.0kb upstream 13657 true Chr05: 38481225-38494881 Gossypium raimondii
Gorai.005G141600 10.0kb upstream 10.0kb upstream 10000 false Chr05: 38484882-38494881 Gossypium raimondii
Gorai.005G141600 10.0kb downstream 10.0kb downstream 13657 true Chr05: 38471225-38484881 Gossypium raimondii
Gorai.005G141600 10.0kb downstream 10.0kb downstream 10000 false Chr05: 38471225-38481224 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835799 5264 Brassicales-Malvales View MSA
124347139 5266 SBM View MSA
124251215 5268 Malvidae View MSA
124070525 5270 Rosid View MSA
123751414 5271 Pentapetalae View MSA
122787187 5272 Eudicot View MSA
122048569 5273 Angiosperm View MSA
121311024 5274 Embryophyte View MSA
123428817 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain