Gene : Gorai.005G146700 G. raimondii v2.1
Defline:  (1 of 3) PF09011 - HMG-box domain (HMG_box_2) Genomic Order:  1467
Name:  ? Gorai.005G146700 Secondary Identifier:  ? PAC:26803304
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G146700 0.5kb upstream 0.5kb upstream 2570 true Chr05: 40018171-40020740 Gossypium raimondii
Gorai.005G146700 0.5kb upstream 0.5kb upstream 500 false Chr05: 40018171-40018670 Gossypium raimondii
Gorai.005G146700 0.5kb downstream 0.5kb downstream 2570 true Chr05: 40018671-40021240 Gossypium raimondii
Gorai.005G146700 0.5kb downstream 0.5kb downstream 500 false Chr05: 40020741-40021240 Gossypium raimondii
Gorai.005G146700 1.0kb upstream 1.0kb upstream 3070 true Chr05: 40017671-40020740 Gossypium raimondii
Gorai.005G146700 1.0kb upstream 1.0kb upstream 1000 false Chr05: 40017671-40018670 Gossypium raimondii
Gorai.005G146700 1.0kb downstream 1.0kb downstream 3070 true Chr05: 40018671-40021740 Gossypium raimondii
Gorai.005G146700 1.0kb downstream 1.0kb downstream 1000 false Chr05: 40020741-40021740 Gossypium raimondii
Gorai.005G146700 2.0kb upstream 2.0kb upstream 4070 true Chr05: 40016671-40020740 Gossypium raimondii
Gorai.005G146700 2.0kb upstream 2.0kb upstream 2000 false Chr05: 40016671-40018670 Gossypium raimondii
Gorai.005G146700 2.0kb downstream 2.0kb downstream 4070 true Chr05: 40018671-40022740 Gossypium raimondii
Gorai.005G146700 2.0kb downstream 2.0kb downstream 2000 false Chr05: 40020741-40022740 Gossypium raimondii
Gorai.005G146700 5.0kb upstream 5.0kb upstream 7070 true Chr05: 40013671-40020740 Gossypium raimondii
Gorai.005G146700 5.0kb upstream 5.0kb upstream 5000 false Chr05: 40013671-40018670 Gossypium raimondii
Gorai.005G146700 5.0kb downstream 5.0kb downstream 7070 true Chr05: 40018671-40025740 Gossypium raimondii
Gorai.005G146700 5.0kb downstream 5.0kb downstream 5000 false Chr05: 40020741-40025740 Gossypium raimondii
Gorai.005G146700 10.0kb upstream 10.0kb upstream 12070 true Chr05: 40008671-40020740 Gossypium raimondii
Gorai.005G146700 10.0kb upstream 10.0kb upstream 10000 false Chr05: 40008671-40018670 Gossypium raimondii
Gorai.005G146700 10.0kb downstream 10.0kb downstream 12070 true Chr05: 40018671-40030740 Gossypium raimondii
Gorai.005G146700 10.0kb downstream 10.0kb downstream 10000 false Chr05: 40020741-40030740 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123833572 5264 Brassicales-Malvales View MSA
124337620 5266 SBM View MSA
124240629 5268 Malvidae View MSA
124064616 5270 Rosid View MSA
123751442 5271 Pentapetalae View MSA
122787834 5272 Eudicot View MSA
122046803 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain