Gene : Gorai.005G145800 G. raimondii v2.1
Defline:  (1 of 4) PTHR33403:SF1 - PROTEIN SPIRAL1 Genomic Order:  1458
Name:  ? Gorai.005G145800 Secondary Identifier:  ? PAC:26803241
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G145800 0.5kb upstream 0.5kb upstream 2622 true Chr05: 39533490-39536111 Gossypium raimondii
Gorai.005G145800 0.5kb upstream 0.5kb upstream 500 false Chr05: 39533490-39533989 Gossypium raimondii
Gorai.005G145800 0.5kb downstream 0.5kb downstream 2622 true Chr05: 39533990-39536611 Gossypium raimondii
Gorai.005G145800 0.5kb downstream 0.5kb downstream 500 false Chr05: 39536112-39536611 Gossypium raimondii
Gorai.005G145800 1.0kb upstream 1.0kb upstream 3122 true Chr05: 39532990-39536111 Gossypium raimondii
Gorai.005G145800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 39532990-39533989 Gossypium raimondii
Gorai.005G145800 1.0kb downstream 1.0kb downstream 3122 true Chr05: 39533990-39537111 Gossypium raimondii
Gorai.005G145800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 39536112-39537111 Gossypium raimondii
Gorai.005G145800 2.0kb upstream 2.0kb upstream 4122 true Chr05: 39531990-39536111 Gossypium raimondii
Gorai.005G145800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 39531990-39533989 Gossypium raimondii
Gorai.005G145800 2.0kb downstream 2.0kb downstream 4122 true Chr05: 39533990-39538111 Gossypium raimondii
Gorai.005G145800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 39536112-39538111 Gossypium raimondii
Gorai.005G145800 5.0kb upstream 5.0kb upstream 7122 true Chr05: 39528990-39536111 Gossypium raimondii
Gorai.005G145800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 39528990-39533989 Gossypium raimondii
Gorai.005G145800 5.0kb downstream 5.0kb downstream 7122 true Chr05: 39533990-39541111 Gossypium raimondii
Gorai.005G145800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 39536112-39541111 Gossypium raimondii
Gorai.005G145800 10.0kb upstream 10.0kb upstream 12122 true Chr05: 39523990-39536111 Gossypium raimondii
Gorai.005G145800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 39523990-39533989 Gossypium raimondii
Gorai.005G145800 10.0kb downstream 10.0kb downstream 12122 true Chr05: 39533990-39546111 Gossypium raimondii
Gorai.005G145800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 39536112-39546111 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123807155 5264 Brassicales-Malvales Singleton cluster - no MSA
124304033 5266 SBM Singleton cluster - no MSA
124154624 5268 Malvidae Singleton cluster - no MSA
124060662 5270 Rosid View MSA
123749851 5271 Pentapetalae View MSA
122787340 5272 Eudicot View MSA
122045105 5273 Angiosperm View MSA
121351504 5274 Embryophyte View MSA
123425662 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain