Gene : Gorai.008G173400 G. raimondii v2.1
Defline:  (1 of 8) 4.2.1.3 - Aconitate hydratase / Citrate(isocitrate) hydro-lyase Genomic Order:  1734
Name:  ? Gorai.008G173400 Secondary Identifier:  ? PAC:26816401
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii GLYOXYLATE-BYPASS Gossypium raimondii pathologic  
Graimondii PWY-5464 Gossypium raimondii pathologic  
Graimondii PWY-561 Gossypium raimondii pathologic  
Graimondii PWY-5690 Gossypium raimondii pathologic  
Graimondii PWY-6549 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G173400 0.5kb upstream 0.5kb upstream 8965 true Chr08: 44885443-44894407 Gossypium raimondii
Gorai.008G173400 0.5kb upstream 0.5kb upstream 500 false Chr08: 44893908-44894407 Gossypium raimondii
Gorai.008G173400 0.5kb downstream 0.5kb downstream 8965 true Chr08: 44884943-44893907 Gossypium raimondii
Gorai.008G173400 0.5kb downstream 0.5kb downstream 500 false Chr08: 44884943-44885442 Gossypium raimondii
Gorai.008G173400 1.0kb upstream 1.0kb upstream 9465 true Chr08: 44885443-44894907 Gossypium raimondii
Gorai.008G173400 1.0kb upstream 1.0kb upstream 1000 false Chr08: 44893908-44894907 Gossypium raimondii
Gorai.008G173400 1.0kb downstream 1.0kb downstream 9465 true Chr08: 44884443-44893907 Gossypium raimondii
Gorai.008G173400 1.0kb downstream 1.0kb downstream 1000 false Chr08: 44884443-44885442 Gossypium raimondii
Gorai.008G173400 2.0kb upstream 2.0kb upstream 10465 true Chr08: 44885443-44895907 Gossypium raimondii
Gorai.008G173400 2.0kb upstream 2.0kb upstream 2000 false Chr08: 44893908-44895907 Gossypium raimondii
Gorai.008G173400 2.0kb downstream 2.0kb downstream 10465 true Chr08: 44883443-44893907 Gossypium raimondii
Gorai.008G173400 2.0kb downstream 2.0kb downstream 2000 false Chr08: 44883443-44885442 Gossypium raimondii
Gorai.008G173400 5.0kb upstream 5.0kb upstream 13465 true Chr08: 44885443-44898907 Gossypium raimondii
Gorai.008G173400 5.0kb upstream 5.0kb upstream 5000 false Chr08: 44893908-44898907 Gossypium raimondii
Gorai.008G173400 5.0kb downstream 5.0kb downstream 13465 true Chr08: 44880443-44893907 Gossypium raimondii
Gorai.008G173400 5.0kb downstream 5.0kb downstream 5000 false Chr08: 44880443-44885442 Gossypium raimondii
Gorai.008G173400 10.0kb upstream 10.0kb upstream 18465 true Chr08: 44885443-44903907 Gossypium raimondii
Gorai.008G173400 10.0kb upstream 10.0kb upstream 10000 false Chr08: 44893908-44903907 Gossypium raimondii
Gorai.008G173400 10.0kb downstream 10.0kb downstream 18465 true Chr08: 44875443-44893907 Gossypium raimondii
Gorai.008G173400 10.0kb downstream 10.0kb downstream 10000 false Chr08: 44875443-44885442 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842916 5264 Brassicales-Malvales View MSA
124323862 5266 SBM View MSA
124253803 5268 Malvidae View MSA
124069488 5270 Rosid View MSA
123752886 5271 Pentapetalae View MSA
122795491 5272 Eudicot View MSA
122043810 5273 Angiosperm View MSA
121344247 5274 Embryophyte View MSA
123428745 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain