Gene : Gorai.008G147900 G. raimondii v2.1
Defline:  (1 of 4) PTHR22763:SF5 - E3 UBIQUITIN-PROTEIN LIGASE CIP8 Genomic Order:  1479
Name:  ? Gorai.008G147900 Secondary Identifier:  ? PAC:26813960
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-7511 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G147900 0.5kb upstream 0.5kb upstream 4030 true Chr08: 40152537-40156566 Gossypium raimondii
Gorai.008G147900 0.5kb upstream 0.5kb upstream 500 false Chr08: 40156067-40156566 Gossypium raimondii
Gorai.008G147900 0.5kb downstream 0.5kb downstream 4030 true Chr08: 40152037-40156066 Gossypium raimondii
Gorai.008G147900 0.5kb downstream 0.5kb downstream 500 false Chr08: 40152037-40152536 Gossypium raimondii
Gorai.008G147900 1.0kb upstream 1.0kb upstream 4530 true Chr08: 40152537-40157066 Gossypium raimondii
Gorai.008G147900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 40156067-40157066 Gossypium raimondii
Gorai.008G147900 1.0kb downstream 1.0kb downstream 4530 true Chr08: 40151537-40156066 Gossypium raimondii
Gorai.008G147900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 40151537-40152536 Gossypium raimondii
Gorai.008G147900 2.0kb upstream 2.0kb upstream 5530 true Chr08: 40152537-40158066 Gossypium raimondii
Gorai.008G147900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 40156067-40158066 Gossypium raimondii
Gorai.008G147900 2.0kb downstream 2.0kb downstream 5530 true Chr08: 40150537-40156066 Gossypium raimondii
Gorai.008G147900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 40150537-40152536 Gossypium raimondii
Gorai.008G147900 5.0kb upstream 5.0kb upstream 8530 true Chr08: 40152537-40161066 Gossypium raimondii
Gorai.008G147900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 40156067-40161066 Gossypium raimondii
Gorai.008G147900 5.0kb downstream 5.0kb downstream 8530 true Chr08: 40147537-40156066 Gossypium raimondii
Gorai.008G147900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 40147537-40152536 Gossypium raimondii
Gorai.008G147900 10.0kb upstream 10.0kb upstream 13530 true Chr08: 40152537-40166066 Gossypium raimondii
Gorai.008G147900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 40156067-40166066 Gossypium raimondii
Gorai.008G147900 10.0kb downstream 10.0kb downstream 13530 true Chr08: 40142537-40156066 Gossypium raimondii
Gorai.008G147900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 40142537-40152536 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123809650 5264 Brassicales-Malvales Singleton cluster - no MSA
124306392 5266 SBM Singleton cluster - no MSA
124156562 5268 Malvidae Singleton cluster - no MSA
124062824 5270 Rosid View MSA
123753393 5271 Pentapetalae View MSA
122788391 5272 Eudicot View MSA
122050385 5273 Angiosperm View MSA
123429130 5275 Viridiplantae View MSA
121349521 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain