Gene : Gorai.008G125200 G. raimondii v2.1
Defline:  (1 of 2) PTHR12601:SF17 - TETRATRICOPEPTIDE REPEAT-CONTAINING PROTEIN Genomic Order:  1252
Name:  ? Gorai.008G125200 Secondary Identifier:  ? PAC:26814121
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G125200 0.5kb upstream 0.5kb upstream 16308 true Chr08: 36472441-36488748 Gossypium raimondii
Gorai.008G125200 0.5kb upstream 0.5kb upstream 500 false Chr08: 36472441-36472940 Gossypium raimondii
Gorai.008G125200 0.5kb downstream 0.5kb downstream 16308 true Chr08: 36472941-36489248 Gossypium raimondii
Gorai.008G125200 0.5kb downstream 0.5kb downstream 500 false Chr08: 36488749-36489248 Gossypium raimondii
Gorai.008G125200 1.0kb upstream 1.0kb upstream 16808 true Chr08: 36471941-36488748 Gossypium raimondii
Gorai.008G125200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 36471941-36472940 Gossypium raimondii
Gorai.008G125200 1.0kb downstream 1.0kb downstream 16808 true Chr08: 36472941-36489748 Gossypium raimondii
Gorai.008G125200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 36488749-36489748 Gossypium raimondii
Gorai.008G125200 2.0kb upstream 2.0kb upstream 17808 true Chr08: 36470941-36488748 Gossypium raimondii
Gorai.008G125200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 36470941-36472940 Gossypium raimondii
Gorai.008G125200 2.0kb downstream 2.0kb downstream 17808 true Chr08: 36472941-36490748 Gossypium raimondii
Gorai.008G125200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 36488749-36490748 Gossypium raimondii
Gorai.008G125200 5.0kb upstream 5.0kb upstream 20808 true Chr08: 36467941-36488748 Gossypium raimondii
Gorai.008G125200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 36467941-36472940 Gossypium raimondii
Gorai.008G125200 5.0kb downstream 5.0kb downstream 20808 true Chr08: 36472941-36493748 Gossypium raimondii
Gorai.008G125200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 36488749-36493748 Gossypium raimondii
Gorai.008G125200 10.0kb upstream 10.0kb upstream 25808 true Chr08: 36462941-36488748 Gossypium raimondii
Gorai.008G125200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 36462941-36472940 Gossypium raimondii
Gorai.008G125200 10.0kb downstream 10.0kb downstream 25808 true Chr08: 36472941-36498748 Gossypium raimondii
Gorai.008G125200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 36488749-36498748 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123835711 5264 Brassicales-Malvales View MSA
124345073 5266 SBM View MSA
124241878 5268 Malvidae View MSA
124073724 5270 Rosid View MSA
123753708 5271 Pentapetalae View MSA
122789807 5272 Eudicot View MSA
122044017 5273 Angiosperm View MSA
121347327 5274 Embryophyte View MSA
123427490 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain