Gene : Gorai.008G100200 G. raimondii v2.1
Defline:  (1 of 1) PTHR13301:SF27 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 2 [UDP-FORMING]-RELATED Genomic Order:  1002
Name:  ? Gorai.008G100200 Secondary Identifier:  ? PAC:26814407
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-1001 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G100200 0.5kb upstream 0.5kb upstream 4642 true Chr08: 29314326-29318967 Gossypium raimondii
Gorai.008G100200 0.5kb upstream 0.5kb upstream 500 false Chr08: 29314326-29314825 Gossypium raimondii
Gorai.008G100200 0.5kb downstream 0.5kb downstream 4642 true Chr08: 29314826-29319467 Gossypium raimondii
Gorai.008G100200 0.5kb downstream 0.5kb downstream 500 false Chr08: 29318968-29319467 Gossypium raimondii
Gorai.008G100200 1.0kb upstream 1.0kb upstream 5142 true Chr08: 29313826-29318967 Gossypium raimondii
Gorai.008G100200 1.0kb upstream 1.0kb upstream 1000 false Chr08: 29313826-29314825 Gossypium raimondii
Gorai.008G100200 1.0kb downstream 1.0kb downstream 5142 true Chr08: 29314826-29319967 Gossypium raimondii
Gorai.008G100200 1.0kb downstream 1.0kb downstream 1000 false Chr08: 29318968-29319967 Gossypium raimondii
Gorai.008G100200 2.0kb upstream 2.0kb upstream 6142 true Chr08: 29312826-29318967 Gossypium raimondii
Gorai.008G100200 2.0kb upstream 2.0kb upstream 2000 false Chr08: 29312826-29314825 Gossypium raimondii
Gorai.008G100200 2.0kb downstream 2.0kb downstream 6142 true Chr08: 29314826-29320967 Gossypium raimondii
Gorai.008G100200 2.0kb downstream 2.0kb downstream 2000 false Chr08: 29318968-29320967 Gossypium raimondii
Gorai.008G100200 5.0kb upstream 5.0kb upstream 9142 true Chr08: 29309826-29318967 Gossypium raimondii
Gorai.008G100200 5.0kb upstream 5.0kb upstream 5000 false Chr08: 29309826-29314825 Gossypium raimondii
Gorai.008G100200 5.0kb downstream 5.0kb downstream 9142 true Chr08: 29314826-29323967 Gossypium raimondii
Gorai.008G100200 5.0kb downstream 5.0kb downstream 5000 false Chr08: 29318968-29323967 Gossypium raimondii
Gorai.008G100200 10.0kb upstream 10.0kb upstream 14142 true Chr08: 29304826-29318967 Gossypium raimondii
Gorai.008G100200 10.0kb upstream 10.0kb upstream 10000 false Chr08: 29304826-29314825 Gossypium raimondii
Gorai.008G100200 10.0kb downstream 10.0kb downstream 14142 true Chr08: 29314826-29328967 Gossypium raimondii
Gorai.008G100200 10.0kb downstream 10.0kb downstream 10000 false Chr08: 29318968-29328967 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123842383 5264 Brassicales-Malvales View MSA
124323449 5266 SBM View MSA
124254069 5268 Malvidae View MSA
124073618 5270 Rosid View MSA
123753400 5271 Pentapetalae View MSA
122797245 5272 Eudicot View MSA
122051318 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain