Gene : Gorai.008G227100 G. raimondii v2.1
Defline:  (1 of 2) PTHR31500:SF17 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2271
Name:  ? Gorai.008G227100 Secondary Identifier:  ? PAC:26816988
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G227100 0.5kb upstream 0.5kb upstream 4431 true Chr08: 51353358-51357788 Gossypium raimondii
Gorai.008G227100 0.5kb upstream 0.5kb upstream 500 false Chr08: 51357289-51357788 Gossypium raimondii
Gorai.008G227100 0.5kb downstream 0.5kb downstream 4431 true Chr08: 51352858-51357288 Gossypium raimondii
Gorai.008G227100 0.5kb downstream 0.5kb downstream 500 false Chr08: 51352858-51353357 Gossypium raimondii
Gorai.008G227100 1.0kb upstream 1.0kb upstream 4931 true Chr08: 51353358-51358288 Gossypium raimondii
Gorai.008G227100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 51357289-51358288 Gossypium raimondii
Gorai.008G227100 1.0kb downstream 1.0kb downstream 4931 true Chr08: 51352358-51357288 Gossypium raimondii
Gorai.008G227100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 51352358-51353357 Gossypium raimondii
Gorai.008G227100 2.0kb upstream 2.0kb upstream 5931 true Chr08: 51353358-51359288 Gossypium raimondii
Gorai.008G227100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 51357289-51359288 Gossypium raimondii
Gorai.008G227100 2.0kb downstream 2.0kb downstream 5931 true Chr08: 51351358-51357288 Gossypium raimondii
Gorai.008G227100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 51351358-51353357 Gossypium raimondii
Gorai.008G227100 5.0kb upstream 5.0kb upstream 8931 true Chr08: 51353358-51362288 Gossypium raimondii
Gorai.008G227100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 51357289-51362288 Gossypium raimondii
Gorai.008G227100 5.0kb downstream 5.0kb downstream 8931 true Chr08: 51348358-51357288 Gossypium raimondii
Gorai.008G227100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 51348358-51353357 Gossypium raimondii
Gorai.008G227100 10.0kb upstream 10.0kb upstream 13931 true Chr08: 51353358-51367288 Gossypium raimondii
Gorai.008G227100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 51357289-51367288 Gossypium raimondii
Gorai.008G227100 10.0kb downstream 10.0kb downstream 13931 true Chr08: 51343358-51357288 Gossypium raimondii
Gorai.008G227100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 51343358-51353357 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123839060 5264 Brassicales-Malvales View MSA
124346948 5266 SBM View MSA
124250687 5268 Malvidae View MSA
124064410 5270 Rosid View MSA
123753724 5271 Pentapetalae View MSA
122796118 5272 Eudicot View MSA
122049850 5273 Angiosperm View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain