Gene : Gorai.008G045500 G. raimondii v2.1
Defline:  (1 of 16) PF01823 - MAC/Perforin domain (MACPF) Genomic Order:  455
Name:  ? Gorai.008G045500 Secondary Identifier:  ? PAC:26814597
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G045500 0.5kb upstream 0.5kb upstream 5973 true Chr08: 6132762-6138734 Gossypium raimondii
Gorai.008G045500 0.5kb upstream 0.5kb upstream 500 false Chr08: 6138235-6138734 Gossypium raimondii
Gorai.008G045500 0.5kb downstream 0.5kb downstream 5973 true Chr08: 6132262-6138234 Gossypium raimondii
Gorai.008G045500 0.5kb downstream 0.5kb downstream 500 false Chr08: 6132262-6132761 Gossypium raimondii
Gorai.008G045500 1.0kb upstream 1.0kb upstream 6473 true Chr08: 6132762-6139234 Gossypium raimondii
Gorai.008G045500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 6138235-6139234 Gossypium raimondii
Gorai.008G045500 1.0kb downstream 1.0kb downstream 6473 true Chr08: 6131762-6138234 Gossypium raimondii
Gorai.008G045500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 6131762-6132761 Gossypium raimondii
Gorai.008G045500 2.0kb upstream 2.0kb upstream 7473 true Chr08: 6132762-6140234 Gossypium raimondii
Gorai.008G045500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 6138235-6140234 Gossypium raimondii
Gorai.008G045500 2.0kb downstream 2.0kb downstream 7473 true Chr08: 6130762-6138234 Gossypium raimondii
Gorai.008G045500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 6130762-6132761 Gossypium raimondii
Gorai.008G045500 5.0kb upstream 5.0kb upstream 10473 true Chr08: 6132762-6143234 Gossypium raimondii
Gorai.008G045500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 6138235-6143234 Gossypium raimondii
Gorai.008G045500 5.0kb downstream 5.0kb downstream 10473 true Chr08: 6127762-6138234 Gossypium raimondii
Gorai.008G045500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 6127762-6132761 Gossypium raimondii
Gorai.008G045500 10.0kb upstream 10.0kb upstream 15473 true Chr08: 6132762-6148234 Gossypium raimondii
Gorai.008G045500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 6138235-6148234 Gossypium raimondii
Gorai.008G045500 10.0kb downstream 10.0kb downstream 15473 true Chr08: 6122762-6138234 Gossypium raimondii
Gorai.008G045500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 6122762-6132761 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123809721 5264 Brassicales-Malvales Singleton cluster - no MSA
124306459 5266 SBM Singleton cluster - no MSA
124252893 5268 Malvidae View MSA
124064187 5270 Rosid View MSA
123748363 5271 Pentapetalae View MSA
122787729 5272 Eudicot View MSA
122047802 5273 Angiosperm View MSA
121349025 5274 Embryophyte View MSA
123381129 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain