Gene : Gorai.005G162800 G. raimondii v2.1
Defline:  (1 of 50) PF01535//PF13041//PF13812 - PPR repeat (PPR) // PPR repeat family (PPR_2) // Pentatricopeptide repeat domain (PPR_3) Genomic Order:  1628
Name:  ? Gorai.005G162800 Secondary Identifier:  ? PAC:26804622
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.005G162800 0.5kb upstream 0.5kb upstream 2789 true Chr05: 47332319-47335107 Gossypium raimondii
Gorai.005G162800 0.5kb upstream 0.5kb upstream 500 false Chr05: 47334608-47335107 Gossypium raimondii
Gorai.005G162800 0.5kb downstream 0.5kb downstream 2789 true Chr05: 47331819-47334607 Gossypium raimondii
Gorai.005G162800 0.5kb downstream 0.5kb downstream 500 false Chr05: 47331819-47332318 Gossypium raimondii
Gorai.005G162800 1.0kb upstream 1.0kb upstream 3289 true Chr05: 47332319-47335607 Gossypium raimondii
Gorai.005G162800 1.0kb upstream 1.0kb upstream 1000 false Chr05: 47334608-47335607 Gossypium raimondii
Gorai.005G162800 1.0kb downstream 1.0kb downstream 3289 true Chr05: 47331319-47334607 Gossypium raimondii
Gorai.005G162800 1.0kb downstream 1.0kb downstream 1000 false Chr05: 47331319-47332318 Gossypium raimondii
Gorai.005G162800 2.0kb upstream 2.0kb upstream 4289 true Chr05: 47332319-47336607 Gossypium raimondii
Gorai.005G162800 2.0kb upstream 2.0kb upstream 2000 false Chr05: 47334608-47336607 Gossypium raimondii
Gorai.005G162800 2.0kb downstream 2.0kb downstream 4289 true Chr05: 47330319-47334607 Gossypium raimondii
Gorai.005G162800 2.0kb downstream 2.0kb downstream 2000 false Chr05: 47330319-47332318 Gossypium raimondii
Gorai.005G162800 5.0kb upstream 5.0kb upstream 7289 true Chr05: 47332319-47339607 Gossypium raimondii
Gorai.005G162800 5.0kb upstream 5.0kb upstream 5000 false Chr05: 47334608-47339607 Gossypium raimondii
Gorai.005G162800 5.0kb downstream 5.0kb downstream 7289 true Chr05: 47327319-47334607 Gossypium raimondii
Gorai.005G162800 5.0kb downstream 5.0kb downstream 5000 false Chr05: 47327319-47332318 Gossypium raimondii
Gorai.005G162800 10.0kb upstream 10.0kb upstream 12289 true Chr05: 47332319-47344607 Gossypium raimondii
Gorai.005G162800 10.0kb upstream 10.0kb upstream 10000 false Chr05: 47334608-47344607 Gossypium raimondii
Gorai.005G162800 10.0kb downstream 10.0kb downstream 12289 true Chr05: 47322319-47334607 Gossypium raimondii
Gorai.005G162800 10.0kb downstream 10.0kb downstream 10000 false Chr05: 47322319-47332318 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123831875 5264 Brassicales-Malvales View MSA
124342962 5266 SBM View MSA
124240747 5268 Malvidae View MSA
124063313 5270 Rosid View MSA
123738652 5271 Pentapetalae View MSA
122793005 5272 Eudicot View MSA
122045173 5273 Angiosperm View MSA
121310410 5274 Embryophyte View MSA
123347900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain