Gene : Gorai.008G270500 G. raimondii v2.1
Defline:  (1 of 1) PTHR30603:SF4 - RNA POLYMERASE SIGMA FACTOR SIGE, CHLOROPLASTIC/MITOCHONDRIAL Genomic Order:  2705
Name:  ? Gorai.008G270500 Secondary Identifier:  ? PAC:26813778
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G270500 0.5kb upstream 0.5kb upstream 3989 true Chr08: 54948050-54952038 Gossypium raimondii
Gorai.008G270500 0.5kb upstream 0.5kb upstream 500 false Chr08: 54951539-54952038 Gossypium raimondii
Gorai.008G270500 0.5kb downstream 0.5kb downstream 3989 true Chr08: 54947550-54951538 Gossypium raimondii
Gorai.008G270500 0.5kb downstream 0.5kb downstream 500 false Chr08: 54947550-54948049 Gossypium raimondii
Gorai.008G270500 1.0kb upstream 1.0kb upstream 4489 true Chr08: 54948050-54952538 Gossypium raimondii
Gorai.008G270500 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54951539-54952538 Gossypium raimondii
Gorai.008G270500 1.0kb downstream 1.0kb downstream 4489 true Chr08: 54947050-54951538 Gossypium raimondii
Gorai.008G270500 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54947050-54948049 Gossypium raimondii
Gorai.008G270500 2.0kb upstream 2.0kb upstream 5489 true Chr08: 54948050-54953538 Gossypium raimondii
Gorai.008G270500 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54951539-54953538 Gossypium raimondii
Gorai.008G270500 2.0kb downstream 2.0kb downstream 5489 true Chr08: 54946050-54951538 Gossypium raimondii
Gorai.008G270500 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54946050-54948049 Gossypium raimondii
Gorai.008G270500 5.0kb upstream 5.0kb upstream 8489 true Chr08: 54948050-54956538 Gossypium raimondii
Gorai.008G270500 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54951539-54956538 Gossypium raimondii
Gorai.008G270500 5.0kb downstream 5.0kb downstream 8489 true Chr08: 54943050-54951538 Gossypium raimondii
Gorai.008G270500 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54943050-54948049 Gossypium raimondii
Gorai.008G270500 10.0kb upstream 10.0kb upstream 13489 true Chr08: 54948050-54961538 Gossypium raimondii
Gorai.008G270500 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54951539-54961538 Gossypium raimondii
Gorai.008G270500 10.0kb downstream 10.0kb downstream 13489 true Chr08: 54938050-54951538 Gossypium raimondii
Gorai.008G270500 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54938050-54948049 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026363 5273 Angiosperm View MSA
123828042 5264 Brassicales-Malvales View MSA
124344212 5266 SBM View MSA
124246245 5268 Malvidae View MSA
124065012 5270 Rosid View MSA
123740689 5271 Pentapetalae View MSA
122788659 5272 Eudicot View MSA
121349199 5274 Embryophyte View MSA
123381214 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain