Gene : Gorai.008G270300 G. raimondii v2.1
Defline:  (1 of 5) PTHR24012:SF386 - PHRAGMOPLASTIN INTERACTING PROTEIN 1 Genomic Order:  2703
Name:  ? Gorai.008G270300 Secondary Identifier:  ? PAC:26813156
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G270300 0.5kb upstream 0.5kb upstream 5701 true Chr08: 54931080-54936780 Gossypium raimondii
Gorai.008G270300 0.5kb upstream 0.5kb upstream 500 false Chr08: 54936281-54936780 Gossypium raimondii
Gorai.008G270300 0.5kb downstream 0.5kb downstream 5701 true Chr08: 54930580-54936280 Gossypium raimondii
Gorai.008G270300 0.5kb downstream 0.5kb downstream 500 false Chr08: 54930580-54931079 Gossypium raimondii
Gorai.008G270300 1.0kb upstream 1.0kb upstream 6201 true Chr08: 54931080-54937280 Gossypium raimondii
Gorai.008G270300 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54936281-54937280 Gossypium raimondii
Gorai.008G270300 1.0kb downstream 1.0kb downstream 6201 true Chr08: 54930080-54936280 Gossypium raimondii
Gorai.008G270300 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54930080-54931079 Gossypium raimondii
Gorai.008G270300 2.0kb upstream 2.0kb upstream 7201 true Chr08: 54931080-54938280 Gossypium raimondii
Gorai.008G270300 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54936281-54938280 Gossypium raimondii
Gorai.008G270300 2.0kb downstream 2.0kb downstream 7201 true Chr08: 54929080-54936280 Gossypium raimondii
Gorai.008G270300 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54929080-54931079 Gossypium raimondii
Gorai.008G270300 5.0kb upstream 5.0kb upstream 10201 true Chr08: 54931080-54941280 Gossypium raimondii
Gorai.008G270300 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54936281-54941280 Gossypium raimondii
Gorai.008G270300 5.0kb downstream 5.0kb downstream 10201 true Chr08: 54926080-54936280 Gossypium raimondii
Gorai.008G270300 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54926080-54931079 Gossypium raimondii
Gorai.008G270300 10.0kb upstream 10.0kb upstream 15201 true Chr08: 54931080-54946280 Gossypium raimondii
Gorai.008G270300 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54936281-54946280 Gossypium raimondii
Gorai.008G270300 10.0kb downstream 10.0kb downstream 15201 true Chr08: 54921080-54936280 Gossypium raimondii
Gorai.008G270300 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54921080-54931079 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829998 5264 Brassicales-Malvales View MSA
124321645 5266 SBM View MSA
124244439 5268 Malvidae View MSA
124060480 5270 Rosid View MSA
123737702 5271 Pentapetalae View MSA
122796328 5272 Eudicot View MSA
122049388 5273 Angiosperm View MSA
121345095 5274 Embryophyte View MSA
123424707 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain