Gene : Gorai.008G291100 G. raimondii v2.1
Defline:  (1 of 1) PTHR10947 - PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47 Genomic Order:  2911
Name:  ? Gorai.008G291100 Secondary Identifier:  ? PAC:26813772
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii TRNA-CHARGING-PWY Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G291100 0.5kb upstream 0.5kb upstream 9518 true Chr08: 56560932-56570449 Gossypium raimondii
Gorai.008G291100 0.5kb upstream 0.5kb upstream 500 false Chr08: 56569950-56570449 Gossypium raimondii
Gorai.008G291100 0.5kb downstream 0.5kb downstream 9518 true Chr08: 56560432-56569949 Gossypium raimondii
Gorai.008G291100 0.5kb downstream 0.5kb downstream 500 false Chr08: 56560432-56560931 Gossypium raimondii
Gorai.008G291100 1.0kb upstream 1.0kb upstream 10018 true Chr08: 56560932-56570949 Gossypium raimondii
Gorai.008G291100 1.0kb upstream 1.0kb upstream 1000 false Chr08: 56569950-56570949 Gossypium raimondii
Gorai.008G291100 1.0kb downstream 1.0kb downstream 10018 true Chr08: 56559932-56569949 Gossypium raimondii
Gorai.008G291100 1.0kb downstream 1.0kb downstream 1000 false Chr08: 56559932-56560931 Gossypium raimondii
Gorai.008G291100 2.0kb upstream 2.0kb upstream 11018 true Chr08: 56560932-56571949 Gossypium raimondii
Gorai.008G291100 2.0kb upstream 2.0kb upstream 2000 false Chr08: 56569950-56571949 Gossypium raimondii
Gorai.008G291100 2.0kb downstream 2.0kb downstream 11018 true Chr08: 56558932-56569949 Gossypium raimondii
Gorai.008G291100 2.0kb downstream 2.0kb downstream 2000 false Chr08: 56558932-56560931 Gossypium raimondii
Gorai.008G291100 5.0kb upstream 5.0kb upstream 14018 true Chr08: 56560932-56574949 Gossypium raimondii
Gorai.008G291100 5.0kb upstream 5.0kb upstream 5000 false Chr08: 56569950-56574949 Gossypium raimondii
Gorai.008G291100 5.0kb downstream 5.0kb downstream 14018 true Chr08: 56555932-56569949 Gossypium raimondii
Gorai.008G291100 5.0kb downstream 5.0kb downstream 5000 false Chr08: 56555932-56560931 Gossypium raimondii
Gorai.008G291100 10.0kb upstream 10.0kb upstream 19018 true Chr08: 56560932-56579949 Gossypium raimondii
Gorai.008G291100 10.0kb upstream 10.0kb upstream 10000 false Chr08: 56569950-56579949 Gossypium raimondii
Gorai.008G291100 10.0kb downstream 10.0kb downstream 19018 true Chr08: 56550932-56569949 Gossypium raimondii
Gorai.008G291100 10.0kb downstream 10.0kb downstream 10000 false Chr08: 56550932-56560931 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123834957 5264 Brassicales-Malvales View MSA
124339817 5266 SBM View MSA
124238696 5268 Malvidae View MSA
124062601 5270 Rosid View MSA
123738962 5271 Pentapetalae View MSA
122792851 5272 Eudicot View MSA
122042437 5273 Angiosperm View MSA
121345306 5274 Embryophyte View MSA
123425015 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain