Gene : Gorai.008G246700 G. raimondii v2.1
Defline:  (1 of 2) PTHR31500:SF9 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Genomic Order:  2467
Name:  ? Gorai.008G246700 Secondary Identifier:  ? PAC:26816101
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii DETOX1-PWY Gossypium raimondii pathologic  
Graimondii DETOX1-PWY-1 Gossypium raimondii pathologic  
Graimondii PWY-6854 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G246700 0.5kb upstream 0.5kb upstream 4852 true Chr08: 53091367-53096218 Gossypium raimondii
Gorai.008G246700 0.5kb upstream 0.5kb upstream 500 false Chr08: 53095719-53096218 Gossypium raimondii
Gorai.008G246700 0.5kb downstream 0.5kb downstream 4852 true Chr08: 53090867-53095718 Gossypium raimondii
Gorai.008G246700 0.5kb downstream 0.5kb downstream 500 false Chr08: 53090867-53091366 Gossypium raimondii
Gorai.008G246700 1.0kb upstream 1.0kb upstream 5352 true Chr08: 53091367-53096718 Gossypium raimondii
Gorai.008G246700 1.0kb upstream 1.0kb upstream 1000 false Chr08: 53095719-53096718 Gossypium raimondii
Gorai.008G246700 1.0kb downstream 1.0kb downstream 5352 true Chr08: 53090367-53095718 Gossypium raimondii
Gorai.008G246700 1.0kb downstream 1.0kb downstream 1000 false Chr08: 53090367-53091366 Gossypium raimondii
Gorai.008G246700 2.0kb upstream 2.0kb upstream 6352 true Chr08: 53091367-53097718 Gossypium raimondii
Gorai.008G246700 2.0kb upstream 2.0kb upstream 2000 false Chr08: 53095719-53097718 Gossypium raimondii
Gorai.008G246700 2.0kb downstream 2.0kb downstream 6352 true Chr08: 53089367-53095718 Gossypium raimondii
Gorai.008G246700 2.0kb downstream 2.0kb downstream 2000 false Chr08: 53089367-53091366 Gossypium raimondii
Gorai.008G246700 5.0kb upstream 5.0kb upstream 9352 true Chr08: 53091367-53100718 Gossypium raimondii
Gorai.008G246700 5.0kb upstream 5.0kb upstream 5000 false Chr08: 53095719-53100718 Gossypium raimondii
Gorai.008G246700 5.0kb downstream 5.0kb downstream 9352 true Chr08: 53086367-53095718 Gossypium raimondii
Gorai.008G246700 5.0kb downstream 5.0kb downstream 5000 false Chr08: 53086367-53091366 Gossypium raimondii
Gorai.008G246700 10.0kb upstream 10.0kb upstream 14352 true Chr08: 53091367-53105718 Gossypium raimondii
Gorai.008G246700 10.0kb upstream 10.0kb upstream 10000 false Chr08: 53095719-53105718 Gossypium raimondii
Gorai.008G246700 10.0kb downstream 10.0kb downstream 14352 true Chr08: 53081367-53095718 Gossypium raimondii
Gorai.008G246700 10.0kb downstream 10.0kb downstream 10000 false Chr08: 53081367-53091366 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
123840437 5264 Brassicales-Malvales View MSA
124346874 5266 SBM View MSA
124247975 5268 Malvidae View MSA
124069510 5270 Rosid View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain