Gene : Gorai.008G274900 G. raimondii v2.1
Defline:  (1 of 2) PTHR21087:SF8 - SHIKIMATE KINASE 1, CHLOROPLASTIC-RELATED Genomic Order:  2749
Name:  ? Gorai.008G274900 Secondary Identifier:  ? PAC:26817275
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ARO-PWY Gossypium raimondii pathologic  
Graimondii PWY-6163 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G274900 0.5kb upstream 0.5kb upstream 6008 true Chr08: 55316967-55322974 Gossypium raimondii
Gorai.008G274900 0.5kb upstream 0.5kb upstream 500 false Chr08: 55316967-55317466 Gossypium raimondii
Gorai.008G274900 0.5kb downstream 0.5kb downstream 6008 true Chr08: 55317467-55323474 Gossypium raimondii
Gorai.008G274900 0.5kb downstream 0.5kb downstream 500 false Chr08: 55322975-55323474 Gossypium raimondii
Gorai.008G274900 1.0kb upstream 1.0kb upstream 6508 true Chr08: 55316467-55322974 Gossypium raimondii
Gorai.008G274900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 55316467-55317466 Gossypium raimondii
Gorai.008G274900 1.0kb downstream 1.0kb downstream 6508 true Chr08: 55317467-55323974 Gossypium raimondii
Gorai.008G274900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 55322975-55323974 Gossypium raimondii
Gorai.008G274900 2.0kb upstream 2.0kb upstream 7508 true Chr08: 55315467-55322974 Gossypium raimondii
Gorai.008G274900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 55315467-55317466 Gossypium raimondii
Gorai.008G274900 2.0kb downstream 2.0kb downstream 7508 true Chr08: 55317467-55324974 Gossypium raimondii
Gorai.008G274900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 55322975-55324974 Gossypium raimondii
Gorai.008G274900 5.0kb upstream 5.0kb upstream 10508 true Chr08: 55312467-55322974 Gossypium raimondii
Gorai.008G274900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 55312467-55317466 Gossypium raimondii
Gorai.008G274900 5.0kb downstream 5.0kb downstream 10508 true Chr08: 55317467-55327974 Gossypium raimondii
Gorai.008G274900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 55322975-55327974 Gossypium raimondii
Gorai.008G274900 10.0kb upstream 10.0kb upstream 15508 true Chr08: 55307467-55322974 Gossypium raimondii
Gorai.008G274900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 55307467-55317466 Gossypium raimondii
Gorai.008G274900 10.0kb downstream 10.0kb downstream 15508 true Chr08: 55317467-55332974 Gossypium raimondii
Gorai.008G274900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 55322975-55332974 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123832651 5264 Brassicales-Malvales View MSA
124346373 5266 SBM View MSA
124243011 5268 Malvidae View MSA
124073160 5270 Rosid View MSA
123746904 5271 Pentapetalae View MSA
122797267 5272 Eudicot View MSA
122046124 5273 Angiosperm View MSA
121349272 5274 Embryophyte View MSA
123425467 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain