Gene : Gorai.008G269900 G. raimondii v2.1
Defline:  (1 of 1) 2.5.1.22 - Spermine synthase / Spermidine aminopropyltransferase Genomic Order:  2699
Name:  ? Gorai.008G269900 Secondary Identifier:  ? PAC:26818956
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Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii ARGSPECAT-PWY Gossypium raimondii pathologic  
Graimondii BSUBPOLYAMSYN-PWY Gossypium raimondii pathologic  
Graimondii POLYAMINSYN3-PWY Gossypium raimondii pathologic  
Graimondii PWY-7528 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G269900 0.5kb upstream 0.5kb upstream 5826 true Chr08: 54872508-54878333 Gossypium raimondii
Gorai.008G269900 0.5kb upstream 0.5kb upstream 500 false Chr08: 54872508-54873007 Gossypium raimondii
Gorai.008G269900 0.5kb downstream 0.5kb downstream 5826 true Chr08: 54873008-54878833 Gossypium raimondii
Gorai.008G269900 0.5kb downstream 0.5kb downstream 500 false Chr08: 54878334-54878833 Gossypium raimondii
Gorai.008G269900 1.0kb upstream 1.0kb upstream 6326 true Chr08: 54872008-54878333 Gossypium raimondii
Gorai.008G269900 1.0kb upstream 1.0kb upstream 1000 false Chr08: 54872008-54873007 Gossypium raimondii
Gorai.008G269900 1.0kb downstream 1.0kb downstream 6326 true Chr08: 54873008-54879333 Gossypium raimondii
Gorai.008G269900 1.0kb downstream 1.0kb downstream 1000 false Chr08: 54878334-54879333 Gossypium raimondii
Gorai.008G269900 2.0kb upstream 2.0kb upstream 7326 true Chr08: 54871008-54878333 Gossypium raimondii
Gorai.008G269900 2.0kb upstream 2.0kb upstream 2000 false Chr08: 54871008-54873007 Gossypium raimondii
Gorai.008G269900 2.0kb downstream 2.0kb downstream 7326 true Chr08: 54873008-54880333 Gossypium raimondii
Gorai.008G269900 2.0kb downstream 2.0kb downstream 2000 false Chr08: 54878334-54880333 Gossypium raimondii
Gorai.008G269900 5.0kb upstream 5.0kb upstream 10326 true Chr08: 54868008-54878333 Gossypium raimondii
Gorai.008G269900 5.0kb upstream 5.0kb upstream 5000 false Chr08: 54868008-54873007 Gossypium raimondii
Gorai.008G269900 5.0kb downstream 5.0kb downstream 10326 true Chr08: 54873008-54883333 Gossypium raimondii
Gorai.008G269900 5.0kb downstream 5.0kb downstream 5000 false Chr08: 54878334-54883333 Gossypium raimondii
Gorai.008G269900 10.0kb upstream 10.0kb upstream 15326 true Chr08: 54863008-54878333 Gossypium raimondii
Gorai.008G269900 10.0kb upstream 10.0kb upstream 10000 false Chr08: 54863008-54873007 Gossypium raimondii
Gorai.008G269900 10.0kb downstream 10.0kb downstream 15326 true Chr08: 54873008-54888333 Gossypium raimondii
Gorai.008G269900 10.0kb downstream 10.0kb downstream 10000 false Chr08: 54878334-54888333 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123829244 5264 Brassicales-Malvales View MSA
124341220 5266 SBM View MSA
124251479 5268 Malvidae View MSA
124062886 5270 Rosid View MSA
123739892 5271 Pentapetalae View MSA
122785821 5272 Eudicot View MSA
122045666 5273 Angiosperm View MSA
121310481 5274 Embryophyte View MSA
123347953 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain