Gene : Gorai.008G156000 G. raimondii v2.1
Defline:  (1 of 2) PTHR11062:SF105 - BETA-1,4-XYLOSYLTRANSFERASE IRX10-RELATED Genomic Order:  1560
Name:  ? Gorai.008G156000 Secondary Identifier:  ? PAC:26819240
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Graimondii PWY-5980 Gossypium raimondii pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Gorai.008G156000 0.5kb upstream 0.5kb upstream 3469 true Chr08: 41658527-41661995 Gossypium raimondii
Gorai.008G156000 0.5kb upstream 0.5kb upstream 500 false Chr08: 41661496-41661995 Gossypium raimondii
Gorai.008G156000 0.5kb downstream 0.5kb downstream 3469 true Chr08: 41658027-41661495 Gossypium raimondii
Gorai.008G156000 0.5kb downstream 0.5kb downstream 500 false Chr08: 41658027-41658526 Gossypium raimondii
Gorai.008G156000 1.0kb upstream 1.0kb upstream 3969 true Chr08: 41658527-41662495 Gossypium raimondii
Gorai.008G156000 1.0kb upstream 1.0kb upstream 1000 false Chr08: 41661496-41662495 Gossypium raimondii
Gorai.008G156000 1.0kb downstream 1.0kb downstream 3969 true Chr08: 41657527-41661495 Gossypium raimondii
Gorai.008G156000 1.0kb downstream 1.0kb downstream 1000 false Chr08: 41657527-41658526 Gossypium raimondii
Gorai.008G156000 2.0kb upstream 2.0kb upstream 4969 true Chr08: 41658527-41663495 Gossypium raimondii
Gorai.008G156000 2.0kb upstream 2.0kb upstream 2000 false Chr08: 41661496-41663495 Gossypium raimondii
Gorai.008G156000 2.0kb downstream 2.0kb downstream 4969 true Chr08: 41656527-41661495 Gossypium raimondii
Gorai.008G156000 2.0kb downstream 2.0kb downstream 2000 false Chr08: 41656527-41658526 Gossypium raimondii
Gorai.008G156000 5.0kb upstream 5.0kb upstream 7969 true Chr08: 41658527-41666495 Gossypium raimondii
Gorai.008G156000 5.0kb upstream 5.0kb upstream 5000 false Chr08: 41661496-41666495 Gossypium raimondii
Gorai.008G156000 5.0kb downstream 5.0kb downstream 7969 true Chr08: 41653527-41661495 Gossypium raimondii
Gorai.008G156000 5.0kb downstream 5.0kb downstream 5000 false Chr08: 41653527-41658526 Gossypium raimondii
Gorai.008G156000 10.0kb upstream 10.0kb upstream 12969 true Chr08: 41658527-41671495 Gossypium raimondii
Gorai.008G156000 10.0kb upstream 10.0kb upstream 10000 false Chr08: 41661496-41671495 Gossypium raimondii
Gorai.008G156000 10.0kb downstream 10.0kb downstream 12969 true Chr08: 41648527-41661495 Gossypium raimondii
Gorai.008G156000 10.0kb downstream 10.0kb downstream 10000 false Chr08: 41648527-41658526 Gossypium raimondii

9 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
123810261 5264 Brassicales-Malvales Singleton cluster - no MSA
124306972 5266 SBM Singleton cluster - no MSA
124157041 5268 Malvidae Singleton cluster - no MSA
124072304 5270 Rosid View MSA
123741163 5271 Pentapetalae View MSA
122792713 5272 Eudicot View MSA
122045479 5273 Angiosperm View MSA
121345748 5274 Embryophyte View MSA
123428712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain